Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq2386 140 3e-28 >seq2386 Length=46605 Score = 140 bits (154), Expect = 3e-28 Identities = 512/745 (69%), Gaps = 59/745 (8%) Strand=Plus/Plus Query 8472 CCACTTCTAC---CCCATCTGGGAAG---CCGCTTCTCTTGAT-GAGTGGCTCTAC-AAC 8523 ||| |||||| | ||| ||||||| | ||||| |||| || ||| | ||| || Sbjct 37240 CCATTTCTACGGCCACATTTGGGAAGGGGCTGCTTCAGTTGAAAGAATGGTTATACCAAT 37299 Query 8524 GGTGGTCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGT 8583 ||||| |||||||| | | || ||||| ||| | |||| | | | || |||||| Sbjct 37300 GGTGG-CCTTACCAATTAATCGTATTCCATTTCTTAATTGGTGCTTCTTGTTGGATGGGT 37358 Query 8584 CGTGAATGGGAA-CTTTCTTACCGCCTT--GGCATGCGTCCTTGGATCTGT-GTTGCATA 8639 |||||||||||| ||| ||| | || || ||||||||||| || | | || |||| Sbjct 37359 CGTGAATGGGAAACTTAGCTACGGTGTTTAGGTATGCGTCCTTG-ATGTTTCGTAGCATT 37417 Query 8640 CTCTGCTCCTGTTGCC-GCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTT 8698 ||||| || || | | || ||| |||| |||||| | | || |||| | |||| | | Sbjct 37418 CTCTG-TCAAGTAGACAGCAGCT-CTGCGGTATTC-TAATTTACCCTTCGGATCAATGGT 37474 Query 8699 CGTT-CT-CTGATGGTATGCCTCTTGGTATC--TCCGGTA-CGTTCAACTATATGCTTG- 8752 ||| || |||| ||||||| | |||||| || |||| | || |||| ||| | | Sbjct 37475 AGTTTCTGCTGACGGTATGCTTTATGGTATTGTTCTGGTAGCATTTAACTTCATGATCGG 37534 Query 8753 TCTTCCAG--GCT-GAGCACAACATCCTGATGCACCCC--TTCCACA-TGCTTGGTGTTG 8806 | ||||| ||| || || ||| | | ||||||| ||||| | || |||||||| Sbjct 37535 TTTTCCAAAAGCTCGAACATAACTTT-TAATGCACCTGGATTCCATAATGGCTGGTGTTG 37593 Query 8807 CTGG-TGTCTTCGGCGGATCTCTCTTTTCCGCAAT-GCATGGTTCA-CTCGTTACTTCTT 8863 |||| ||| |||| || | | | || || ||||||||| || || | ||| Sbjct 37594 CTGGATGTTTTCGT-GGTTATTATATCAGTGCTATCGCATGGTTCTTCTAGTAA-TTCAA 37651 Query 8864 CGCTGGTTCGTGAGACCACC-GAAACCGAGTCTCAAAACTATGGCTACAAG-TTCGGTCA 8921 | | ||||| || | ||| || ||| || || || ||||| ||||| || Sbjct 37652 GTTTAATACGTGAAACGAAGTGAAGTTGAATCTGTTAA-TACGGTTACAAAATTCGGACA 37710 Query 8922 -AGA-AGAGGAAACTTACAACATTGTTGCCGCTCAT-GGCTACTTTGG--TCGCTTGATC 8976 ||| ||| ||||||||||||||||| || || ||| || |||||||| || || ||| Sbjct 37711 GAGATAGAAGAAACTTACAACATTGTAGCTGCACATAGGTTACTTTGGGTGCGTTTAATC 37770 Query 8977 TT--CCAATATGCATCT--TTT--AACA-ATTCTAGAAGC-TTGCATTTCTTCCTCGCTG 9028 || || || ||| || ||| |||| | |||||| || || ||||||||||| || | Sbjct 37771 TTGCGCAGTA-GCAGCTAGTTTACAACAGACTCTAGAGGCTTTACATTTCTTCCTTGC-G 37828 Query 9029 CGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATGGCTTTCAACC 9088 | ||||||| || || || ||||| || || | || || | || ||||| || ||| Sbjct 37829 CATGGCCTGAAGTTGGGATTTGGTTAACAGCTTTAGGTGT-TGTACTATGGCATTTAACT 37887 Query 9089 TCAATGGCTTCAACTTCAACCAGTCCATTATCGA-CGGACAAGGACGAGTGCTCAACACC 9147 | ||||| || | ||| |||||||| || | || | | |||| || || | | || Sbjct 37888 TAAATGG-TTTAGCTTTAACCAGTCTGTTGTAGATAGTAGAAGGTCGTGTATTAACGACA 37946 Query 9148 TGGGCAGACGTACTTAACCGCGCAG 9172 ||||| ||| || |||||| |||| Sbjct 37947 TGGGCTGACATA--TAACCGTGCAG 37969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516393960888000