Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq2809 120 4e-22 >seq2809 Length=30156 Score = 120 bits (132), Expect = 4e-22 Identities = 240/346 (69%), Gaps = 16/346 (5%) Strand=Plus/Minus Query 139439 AAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGAC--TATCAGTG 139496 |||||||| || ||||||| || ||||| || | | ||||||||||| |||| ||| Sbjct 10095 AAAGGAATAATACTAGCAGGAGGTTCTGGAACAAGGCTTCATCCATTGACATTATCGGTG 10036 Query 139497 TTTCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCA-TTGACA-AC 139554 | || ||| |||| ||||| |||||||| || ||||| || || || || || || Sbjct 10035 AGT--AAGCAGCTATTGCCTGTTTACGATAAGCCTATGATATATTACCCTCTTTCCATAC 9978 Query 139555 TCTTATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAGGATAGAAATTC 139614 || | | | |||| |||| || || || || || ||||| || | ||| | | Sbjct 9977 TCATGTTGT--CTGGAATAAGAGAGATTCTCATCATTTCAACTCCCCGGGACTTACCTCT 9920 Query 139615 TTTCGAGAACTTACTAGGTAACGGTTCACAATTTG-GTGTT---AGAATAGAATACGCTG 139670 ||| || | | ||||| | || | ||| | | ||| || ||| || |||| Sbjct 9919 TTTTGAACAGATGCTAGGAGATGG---AAAATCTCTGGGTTGCGAGTTTAGC-TATGCTG 9864 Query 139671 TTCAAGAAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTA 139730 | || ||||| || | || || || || || ||| |||| ||||||||||| || |||| Sbjct 9863 TGCAGGAAAAGCCCGAAGGGTTGGCTCAGGCCTTCATTATTGGTGAAGAATTTATCGGTA 9804 Query 139731 AATCTAAAGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCTTC 139776 | |||||| || ||| |||| ||||| ||||||||| |||| || Sbjct 9803 ACGATAAAGTTGCACTGGTTTTGGGTGATAACATTTTCTATGCATC 9758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701745478497440