Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq3998 91.5 2e-13 seq6597 87.8 3e-12 >seq3998 Length=11755 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 198942 TAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGAGTCCAGTA 199001 ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| Sbjct 1922 TAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCCTGGTTCGAGTCCAGGT 1863 Query 199002 GGGGCCACCA 199011 ||| |||||| Sbjct 1862 GGGCCCACCA 1853 >seq6597 Length=2484 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 198942 TAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGAGTCCAGTA 199001 ||||||||||||||||||||| ||||||||||| |||||| | ||||||||||| | Sbjct 1890 TAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCCCAGGTTCGAGTCCTGGT 1949 Query 199002 GGGGCCACCAGATAAA 199017 ||| |||||| ||||| Sbjct 1950 GGGCCCACCATATAAA 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741326083764760