Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq2944 129 9e-25 >seq2944 Length=26024 Score = 129 bits (142), Expect = 9e-25 Identities = 205/285 (72%), Gaps = 7/285 (2%) Strand=Plus/Plus Query 122385 TGCGTGACGTTCGTGACAACGGGCACGAA-AAAGCAGACCGTACGGGCACGGGCAC-CCT 122442 |||| |||| ||| ||||| ||| | ||| |||||||||||||||| ||||| | Sbjct 9749 TGCGCTACGTGTATGAGAACGG-CACTACTAAAACAGACCGTACGGGCACAGGCACGCGC 9807 Query 122443 GTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAAAGGTTTCCCGCTGGTCACGAC 122502 |||| || ||| |||||||| ||| | ||||| |||| |||||||| | | || Sbjct 9808 AGCGTT-TTTGGCTACCAAATGCGTTTTAATTTGCAAGAAGG-TTCCCGCTTATATCTAC 9865 Query 122503 CAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTGTGGTTCCTCATGGGCGATAC 122562 ||||| |||||||| || || || || ||| | ||||||| | | || ||||| Sbjct 9866 TAAAAAAGTTCACCTAAAATCTATAATACACGAGTTATTGTGGTT-TTTAAAGGAGATAC 9924 Query 122563 CAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGGGATGAATGGGCAGATGAAGA 122622 || || |||| || ||||| || || || || || ||||| |||||||| |||||| | Sbjct 9925 TAATATTAAGTACCTTAAAGATAATAATGTTAGAAT-TGGGACGAATGGGCCGATGAAAA 9983 Query 122623 TGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGTGAGTGGCC 122667 ||| || | || || || ||||| | |||||||| | ||||| Sbjct 9984 TGGAGATTTAGGGCCTGTATACGGACACCAATGGCGCAACTGGCC 10028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777502456229200