Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq2809 93.3 4e-14 >seq2809 Length=30156 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 39732 AATAGCTCGCGCATGATCCTCAACAAAAAGCCAGTCTCGCACCTGGTCGCCTTTACCATA 39791 |||||||| ||||||||||| ||||| | |||||| || | | || ||||| ||||| Sbjct 10449 AATAGCTCTGGCATGATCCTCCACAAATAACCAGTCACGGATATTTTCCCCTTTGCCATA 10508 Query 39792 CACCGGAATCTCTTTATTCGTCAAGATACTTGTGATGATTTTTGGGATCAGCTTTTCTGG 39851 | || | ||||| || || | ||||||| || |||| |||||| || Sbjct 10509 AATAGGTAAAGGCTTATTGTTCTGAATGTTATTGATGATGAGCGGAATCAACTTTTCAGG 10568 Query 39852 ATGTTGATAAGGCCCAAAGTTATTGGAGCAGTTGGTTATCACAACAGGCAAATCGTAGGT 39911 | || | || ||| | ||||| || || |||| | ||||||||| || || ||||| Sbjct 10569 AAAGTGGTGAGAACCATAATTATTTGAACAATTGGAGAGCACAACAGGTAAGTCATAGGT 10628 Query 39912 GCGGTGCCAAGCTTTCACAAGATGGTCAGATGCTGCCTTAGACGCA 39957 | ||| | || |||||| ||| ||||| || || || || ||| Sbjct 10629 GTTGTGGTAGGCCCTCACAAAATGATCAGAAGCCGCTTTTGAAGCA 10674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472551665683240