Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_020199.1 Length=47252 Score E Sequences producing significant alignments: (Bits) Value seq2099 84.2 7e-12 >seq2099 Length=62717 Score = 84.2 bits (92), Expect = 7e-12 Identities = 154/220 (70%), Gaps = 17/220 (8%) Strand=Plus/Minus Query 10095 GCGTATTG--GCTTACCTGCTTCGCTTGATAAAGTTGGAGAAGTTTTAA--------GAC 10144 |||||||| | ||||| ||||||||||| ||| ||| ||||| || Sbjct 35798 GCGTATTGTGGGTTACCCCTTTCGCTTGATATGGTTTCTAAAGCTTTAAACTTTGCAGAA 35739 Query 10145 TACAAAGCCAAAAA-GATAAAGCAGGTAAAAATTTAATTCGTTATTTCTCTATACCTTGT 10203 |||||||||| | || |||||||| || || ||||||||||| || ||||| Sbjct 35738 GACAAAGCCAAGCTTGCTA---CAGGTAAAGCGTTGATCCGTTATTTCTCCATTCCTTGC 35682 Query 10204 AAACCAACAAAAGTTAATG-GAGGAAGAACAAGAAA-CCTACCTGAACATGATCTTGAAA 10261 ||||| || |||| || | | |||||||| ||||| | | || || |||||||| | Sbjct 35681 AAACCCACCAAAGCCAACGCGCGGAAGAACTAGAAATTATCCTTGCAC-CGATCTTGATA 35623 Query 10262 AATGGCAACAATTTATAGATTACTGTATTCGAGATGTAGA 10301 ||||| |||| | | ||| || ||||| | |||||||| Sbjct 35622 AATGGGAACAGTACAAAGACTATTGTATGCAGGATGTAGA 35583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151060889602836