Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq4750 95.1 1e-14 seq4604 87.8 2e-12 seq7597 82.4 9e-11 >seq4750 Length=7679 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 18009 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 18067 ||||||||||||||| ||| |||||||||||| ||||| |||||| |||| |||||||| Sbjct 5231 GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGAC 5290 Query 18068 TCCGCTATTCTCCA 18081 |||| ||||||||| Sbjct 5291 TCCGATATTCTCCA 5304 >seq4604 Length=8381 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 18008 CGGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGA 18066 ||||| |||||||||| ||| |||||||||||| ||||| |||||| |||| |||||||| Sbjct 4063 CGGGGGATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGA 4122 Query 18067 GTCCGCTATTCTCCA 18081 |||| ||| ||||| Sbjct 4123 CTCCGATATCCTCCA 4137 >seq7597 Length=1512 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 18007 tCGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGA 18066 ||||||| ||||||| |||||||||| ||||||||||||||||||||| | ||||| | Sbjct 323 TCGGGGACGTAGCTCAATTGGTAGAGCACCTGCTTTGCAAGCAGGATGTTATGGGTTCAA 264 Query 18067 GTCCGCTATTCTCCA 18081 |||| | |||||| Sbjct 263 GTCCCTTCGTCTCCA 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561154503098800