Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq2386 168 8e-37 >seq2386 Length=46605 Score = 168 bits (186), Expect = 8e-37 Identities = 412/577 (71%), Gaps = 47/577 (8%) Strand=Plus/Minus Query 67470 TCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCC 67529 || || || || ||||| ||| | ||||| || | ||| ||||||||||| | ||||| Sbjct 37920 TCTACAACAGACTGGTTAAAGCT-AAACCATTTAAGTTAAATGCCATAGTACA-ACACCT 37863 Query 67530 ATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGA-CTTCT 67588 | || || ||||| || | || |||| |||| ||||||||||| || | | | ||| Sbjct 37862 AAAGCTGTTAACCAAATCCCAACTTCAGGCCATGC-GCAAGGAAGAAATGTAAAGCCTCT 37804 Query 67589 TGAGT-TGTTGAAA----GATGCATACTGG--AAGATCAAGCGA--CCGAAGTATCC-AT 67638 |||| ||||| || | ||| ||||| ||||| || || || ||||| || || Sbjct 37803 AGAGTCTGTTGTAAACTAGCTGC-TACTGCGCAAGATTAAACGCACCCAAAGTAACCTAT 37745 Query 67639 GAGCAGCAACAATGTTGTAAGTCTCTTCT-TCT-TGTCCGAA-CTTGTAACCGTAGTTCT 67695 | ||||| |||||||||||||| |||||| ||| |||||||| ||||||||||| || Sbjct 37744 GTGCAGCTACAATGTTGTAAGTTTCTTCTATCTCTGTCCGAATTTTGTAACCGTA-TTAA 37686 Query 67696 GTGACTCTTGCTCA-GTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGC-AT 67753 || || ||| | ||||| | || | | ||| || | |||||| ||| || Sbjct 37685 CAGATTCAACTTCACTTCGTTTCACGTATTAAACTTGAATTACTAGAAGAACCATGCGAT 37626 Query 67754 AGCACT-AAAGAGTGAACCACCGAATACA-CCTGCTACTCCAAGCA-TATGGAAT--GGG 67808 |||||| | | | | ||||| |||| ||| || || || ||| || |||||||| || Sbjct 37625 AGCACTGATATAAT-AACCA-CGAAAACATCCAGCAACACCAGCCATTATGGAATCCAGG 37568 Query 67809 TGCATAAGGATGTTGTGCTC-TGC--TTGGAACA-CGAACATGTAGTTAAAAG-TACCAG 67863 ||||| | | ||| || || || |||||| | ||| |||| ||||||| | |||||| Sbjct 37567 TGCATTA-AAAGTTATGTTCGAGCTTTTGGAAAACCGATCATGAAGTTAAATGCTACCAG 37509 Query 67864 A--AATACCAAGAGGCATTGCGTCAG-AGAAAGAACC-TTGACCGAAAGGATAGACCAAG 67919 | ||||||| | |||| |||||| ||||| ||| |||| | |||| || | || Sbjct 37508 AACAATACCATAAAGCATACCGTCAGCAGAAACTACCATTGATCCGAAGGGTA-AATTAG 37450 Query 67920 AACACAGCGAATGCTGCAGAC-ACTGGAGCAGAGTATGCTAC-ACAGATCCAAGGACGCA 67977 || || || | ||||| | | ||| || ||||| ||||||| | | || |||||||||| Sbjct 37449 AATACCGC-AGAGCTGCTGTCTACTTGA-CAGAGAATGCTACGAAACAT-CAAGGACGCA 37393 Query 67978 TACC--AAGACGGTAAGAAAG-TTCCCACTGACGACC 68011 |||| || || ||| ||| |||||| | |||||| Sbjct 37392 TACCTAAACACCGTAGCTAAGTTTCCCATTCACGACC 37356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566852753683320