Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq2386 185 1e-41 >seq2386 Length=46605 Score = 185 bits (204), Expect = 1e-41 Identities = 509/725 (70%), Gaps = 60/725 (8%) Strand=Plus/Minus Query 67947 ACTATCAAGGATAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAAC 68006 |||||| | | ||||||||| ||| | |||||||| | ||| |||||||| || | ||| Sbjct 37924 ACTATCTACAACAGACTGGTTAAAGCT-AAACCATTTAAGTTAAATGCCATAGTAC-AAC 37867 Query 68007 ACCAAGTGCAGTGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGA 68066 ||| | || || ||||| || ||||| |||||||||| ||||||||||| || | | Sbjct 37866 ACCTAAAGCTGTTAACCAAATCCCAACTTCAGGCCATGC-GCAAGGAAGAAATGTAAAGC 37808 Query 68067 A-CGGGAGT-TGTTG--AACGA--TGCATACTGG--AAGATCAGACGA--CCGAAGTATC 68116 | |||| ||||| ||| | ||| ||||| ||||| | ||| || ||||| | Sbjct 37807 CTCTAGAGTCTGTTGTAAACTAGCTGC-TACTGCGCAAGATTAAACGCACCCAAAGTAAC 37749 Query 68117 C-ATGTGCAGCAACAATGTTGTAAGTCTCTTCT-TCT-TGACCGAA-CTTGTAACCATAG 68172 | ||||||||| |||||||||||||| |||||| ||| || ||||| |||||||| || Sbjct 37748 CTATGTGCAGCTACAATGTTGTAAGTTTCTTCTATCTCTGTCCGAATTTTGTAACCGTA- 37690 Query 68173 TTCTGGGACTCAGTTTCA-GTGGTTTCACGAACCAGTGAAGAAGTAACCAG-GGAACCAT 68230 || || ||| |||| | |||||||| | | ||| | || || ||||||| Sbjct 37689 TTAACAGATTCAACTTCACTTCGTTTCACGTATTAAACTTGAA-TTACTAGAAGAACCAT 37631 Query 68231 GC-ATTGCACTGAACAGAGATCCACCAAATACGCCAGCAACGCCGAGCA-TATGGAA--G 68286 || || ||||||| | | |||| ||| |||||||| || || ||||||| Sbjct 37630 GCGATAGCACTGATATAATAACCACGAAAACATCCAGCAACACCAGCCATTATGGAATCC 37571 Query 68287 GGGTGCATCAGGATGTTGTGCTC-TGC--TTGGAACACC-AGCATGTAGTTGAAAG-TAC 68341 ||||||| | | ||| || || || |||||| ||| | |||| |||| || | ||| Sbjct 37570 AGGTGCATTA-AAAGTTATGTTCGAGCTTTTGGAAAACCGATCATGAAGTTAAATGCTAC 37512 Query 68342 CAGA--AATGCCGAGAGGCATTGCGTCAG-AG-AACGAACCTTGACCGAAAGGATAGACC 68397 |||| ||| || | |||| |||||| || ||| | | |||| | |||| || | Sbjct 37511 CAGAACAATACCATAAAGCATACCGTCAGCAGAAACTACCATTGATCCGAAGGGTAAATT 37452 Query 68398 AGGAAGACTGCGGATGCTGCTG-CAACAGGTGCAGAGTATGCAAC-ACAGATCCAAGGAC 68455 | ||| || || || ||||||| | || | ||||| |||| || | | || ||||||| Sbjct 37451 A-GAATACCGCAGA-GCTGCTGTCTACTTG-ACAGAGAATGCTACGAAACAT-CAAGGAC 37396 Query 68456 GCATACC--AAGACGATAGGAAAG-TTCCCATTCACGTCCCATGTATGCAAAGATACCAA 68512 ||||||| || || ||| ||| |||||||||||| ||||| | | | ||||| Sbjct 37395 GCATACCTAAACACCGTAGCTAAGTTTCCCATTCACGACCCATCCAACAAGAAGCACCAA 37336 Query 68513 TCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATT-GTACAACCACTC-ATCAAG 68570 | | ||| || || | | | |||| |||| |||||||| ||| ||||| || |||| Sbjct 37335 TTAAGAAATGGAATACGATTAATTGGTAAGG-CCACCATTGGTATAACCATTCTTTCAAC 37277 Query 68571 GGTTGCTG---CTTCCCAAATG-----GGATAAAAGTGAAGACCAA--TTGCATTTGA-A 68619 | || | ||||||||||| | | ||| | ||| ||||| |||| ||||| | Sbjct 37276 TGAAGCAGCCCCTTCCCAAATGTGGCCGTAGAAATGGGAATACCAAACTTGC-TTTGATA 37218 Query 68620 CTAGG 68624 ||||| Sbjct 37217 CTAGG 37213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571959102887640