Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq11863 93.3 1e-14 >seq11863 Length=592 Score = 93.3 bits (102), Expect = 1e-14 Identities = 122/166 (73%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 40452 CCGTACTTCCGGGTGACGTACTGGATCACC---TCGCCACGACGCCGGTCATCGAAGTCG 40508 |||||||| || ||||| | ||||||| |||| || | || || ||| ||| Sbjct 430 CCGTACTTGTCGGCCACGTAGTCGATCACCCGATCGCGGCG-CTCCATGCA--GAAATCG 486 Query 40509 ATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCG 40568 | ||| | |||||||| || || |||||||| || || || |||||||| | ||| || Sbjct 487 ACGTCAAAGTCGGGCATCGATACCCGCTCGGGATTGAGAAAGCGCTCGAACAGGAGATCG 546 Query 40569 TGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCA 40614 | || ||| |||||||||||||||||| | || || |||| |||| Sbjct 547 TACTGCAGTGGGTCGAGGTCGGTGATCTCCAGCGCGAAGGCAACCA 592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163858863898836