Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq11863 96.9 1e-15 >seq11863 Length=592 Score = 96.9 bits (106), Expect = 1e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 40250 GAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGAT 40309 ||| |||| ||| | |||||||| || || |||||||| || || ||||||||||| | Sbjct 480 GAAATCGACGTCAAAGTCGGGCATCGATACCCGCTCGGGATTGAGAAAGCGCTCGAACAG 539 Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCA 40362 ||| ||| || ||| |||||||||||||||||| | || || |||| |||| Sbjct 540 GAGATCGTACTGCAGTGGGTCGAGGTCGGTGATCTCCAGCGCGAAGGCAACCA 592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163298952523386