Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq2944 129 8e-25 >seq2944 Length=26024 Score = 129 bits (142), Expect = 8e-25 Identities = 190/263 (72%), Gaps = 7/263 (3%) Strand=Plus/Plus Query 98930 TGCGAAAGGTACGCCGAAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCA 98989 || ||| || || | || | ||||||||| || |||||||||| | || ||| | Sbjct 9762 TGAGAACGGCACTACTAAAACAGACCGTACGGGCACAGGCACGCGCAGCGTTTTTGGCTA 9821 Query 98990 CCAGATGCGTTTCAACTTGCAAGAAGGTTTCCCGCTGGTAACGAC--CAAGCGTTGCCAC 99047 ||| |||||||| || ||||||||||| |||||||| || | || || ||| ||| Sbjct 9822 CCAAATGCGTTTTAATTTGCAAGAAGG-TTCCCGCTTATATCTACTAAAAAAGTT--CAC 9878 Query 99048 CTGCGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTAC 99107 || ||||| || || || | ||||||| | ||||| || || ||||| ||||| Sbjct 9879 CTAAAATCTATAATACACGAGTTATTGTGGTT-TTTAAAGGAGATACTAATATTAAGTAC 9937 Query 99108 CTGAAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGT 99167 || ||||||||| ||| | | ||||||||||||||| || ||||||| || | || Sbjct 9938 CTTAAAGATAATAATGTTA-GAATTGGGACGAATGGGCCGATGAAAATGGAGATTTAGGG 9996 Query 99168 CCGGTATACGGTAAGCAGTGGCG 99190 || |||||||| | || ||||| Sbjct 9997 CCTGTATACGGACACCAATGGCG 10019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716517417267080