Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq6294 102 1e-16 seq8845 86.0 1e-11 >seq6294 Length=3007 Score = 102 bits (112), Expect = 1e-16 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 120223 TTTTTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTT 120282 ||||||||| |||||||||| ||||||||||||||| |||||||||||||||| || ||| Sbjct 644 TTTTTGCCGCTATAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGTAGGTCCCGAGTT 703 Query 120283 CGATCCCTGATGCCGGCACCA 120303 ||| | || || |||||||| Sbjct 704 CGACTCTTGGTGGCGGCACCA 724 >seq8845 Length=1009 Score = 86.0 bits (94), Expect = 1e-11 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 120235 TAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATCCC 120289 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 657 TAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCATTGGTTCGATCCC 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825779212585080