Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq76 89.7 4e-13 >seq76 Length=624063 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | || || || || || ||| | || ||| | | Sbjct 335840 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTGGATGTCGAGCCGTCC 335899 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || || ||||| || || |||||| | ||| || ||| Sbjct 335900 GACACAATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAG 335959 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | |||||| || ||| ||||||||| | || || ||||||||||| Sbjct 335960 CAGCGTCTCATCTTTGCGGGGAAGCAGTTGGAGGACGGCCGCACGCTGTCGGACTACAAC 336019 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| || | ||| ||||| | | |||||||| || Sbjct 336020 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTTCGCTTGCGAGGTGG 336066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398812013308303