Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq3561 91.5 2e-13 seq6130 87.8 3e-12 >seq3561 Length=15242 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/79 (86%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 97402 GTAGCCATGGGCAGGATTGAACTGCCGACCCCACCCTTATCAGGGGTGTGCTCTA--CCA 97459 |||| | ||||||| |||||||||||||| ||||||||||||||||| |||||| | | Sbjct 2344 GTAGGCCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGTGCGCTCTAACCAA 2403 Query 97460 CTGAGCTACATGGCTATAA 97478 |||||||||| | |||||| Sbjct 2404 CTGAGCTACAGGCCTATAA 2422 >seq6130 Length=3286 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/72 (88%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 97400 TGGTAGCCATGGGCAGGATTGAACTGCCGACCCCACCCTTATCAGGGGTGTGCTCTA--C 97457 |||||| | ||||||| |||||||||||||| ||||||||||||||||| |||||| | Sbjct 367 TGGTAGGCCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGTGCGCTCTAACC 308 Query 97458 CACTGAGCTACA 97469 ||||||||||| Sbjct 307 AACTGAGCTACA 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710172874364720