Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq2809 125 7e-24 >seq2809 Length=30156 Score = 125 bits (138), Expect = 7e-24 Identities = 232/338 (69%), Gaps = 2/338 (1%) Strand=Plus/Plus Query 26451 CAAAGAATAAATTATCACCTAGCACAAGTGCTACAGAATCTTCACCAATAAAGTTCTCAC 26510 || |||| | |||||||| | || ||||| || ||| | ||| ||||| | |||| Sbjct 9762 CATAGAAAATGTTATCACCCAAAACCAGTGCAACTTTATCGTTACCGATAAATTCTTCAC 9821 Query 26511 CAATAATAAACGCTTCTGCTAAACCTTTTGGGCTATCCTGTATTGCATA-CTGTAGGGAA 26569 ||||||| || || | || || |||| || | ||||| | ||||| || | Sbjct 9822 CAATAATGAAGGCCTGAGCCAACCCTTCGGGCTTTTCCTGCACAGCATAGCTAAACTCGC 9881 Query 26570 ATACCAAAAGAAGAACCATCACCTAGAAGATTTACAAAATTAATTTGATCTTCTGGTGTT 26629 | ||| | ||| ||||| ||||| | | | ||||| | | || || ||| Sbjct 9882 A-ACCCAGAGATTTTCCATCTCCTAGCATCTGTTCAAAAAGAGGTAAGTCCCGGGGAGTT 9940 Query 26630 GTAATTATTAGTATTTCCCTAATTCCAGAAAGCATTAGGACAGAGAGTGGATAATAAATC 26689 | ||| || || || || || |||||||| | ||| || | || || || ||||| ||| Sbjct 9941 GAAATGATGAGAATCTCTCTTATTCCAGACAACATGAGTATGGAAAGAGGGTAATATATC 10000 Query 26690 ATAGGTTTATCGTAAATTGGTAATAGTTGTTTACTAACCCCTTTAGTAACTGGGTAAAGC 26749 ||||| |||||||||| || ||||| || ||||| ||| | || | ||| | |||| Sbjct 10001 ATAGGCTTATCGTAAACAGGCAATAGCTGCTTACTCACCGATAATGTCAATGGATGAAGC 10060 Query 26750 CTTGTTCCACTACCACCTGCTAAGATAATACCTTTCAT 26787 ||||||||| ||| ||||||| || || |||||||| Sbjct 10061 CTTGTTCCAGAACCTCCTGCTAGTATTATTCCTTTCAT 10098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475351199238240