Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq9549 100 9e-16 >seq9549 Length=848 Score = 100 bits (110), Expect = 9e-16 Identities = 202/300 (67%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 188854 GATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTT 188913 |||||||| |||| || ||||| || ||||| || |||||||| || ||| | | || Sbjct 300 GATGCAACGACTTTGACCGAAGCCGGCTATGTTGGCGAAGATGTCGAGAACATCATTCTG 241 Query 188914 CGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATC 188973 | | || | | || || || ||||| || |||| || || || ||||| Sbjct 240 AAACTGCTGCAGTCGTCCGACTATAATGTCGAAAAGGCACAACGCGGCATCGTCTATATT 181 Query 188974 GATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCT 189033 || ||| | || || ||| | || | |||| | || |||||||| ||||| || Sbjct 180 GACGAAATCGACAAGATTAGCCGCAAGGCGGAAAATCCGTCGATTACCCGCGATGTGTCG 121 Query 189034 GGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCT 189093 || ||||| || ||||| ||||| | || | || ||||| ||| || | || ||| Sbjct 120 GGGGAAGGCGTTCAGCAGGCTTTGCTGAAGCTGATGGAAGGCACAACCGCCAGTGTCCCT 61 Query 189094 CCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATC 189153 |||||||| || || || || || || || ||| | || | | ||||| || |||||| Sbjct 60 CCTCAAGGCGGCCGCAAGCATCCCCAGCAGGAATTTCTGCAGGTCGATACCACCAATATC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591638577816896