Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_026607.2 Length=159914 Score E Sequences producing significant alignments: (Bits) Value seq6597 84.2 2e-11 seq3347 84.2 2e-11 >seq6597 Length=2484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 62444 TTATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTC 62503 |||| |||||| ||| | ||||| ||||| | ||||||| ||||||||||| ||||||| Sbjct 1964 TTATATGGTGGGCCCACCAGGACTCGAACCTGGGACCAAGGGATTATGAGTCCCCTGCTC 1905 Query 62504 TAACC-ACTGAGCTAAGGGGCCG 62525 ||||| ||||||||| || ||| Sbjct 1904 TAACCAACTGAGCTATAGGCCCG 1882 >seq3347 Length=17785 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 62449 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 62508 |||||| ||| | ||||||||||| ||||||| ||||||||||||| ||||||| ||| Sbjct 339 TGGTGGGCCCAGTAGGACTTGAACCTACGACCAATCGATTATGAGTCGACTGCTCTGACC 280 Query 62509 -ACTGAGCTAAGGGGCCG 62525 ||||||||| ||| ||| Sbjct 279 AACTGAGCTATGGGCCCG 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511511574368080