Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq2386 149 7e-31 >seq2386 Length=46605 Score = 149 bits (164), Expect = 7e-31 Identities = 525/757 (69%), Gaps = 65/757 (9%) Strand=Plus/Plus Query 157877 CCTAGT-TCAAACGCAA--TCGGTCT--CCACTTCTAC---CCCATCTGGGAAG---CAG 157925 |||||| ||||| |||| | ||| | ||| |||||| | ||| ||||||| | | Sbjct 37213 CCTAGTATCAAA-GCAAGTTTGGTATTCCCATTTCTACGGCCACATTTGGGAAGGGGCTG 37271 Query 157926 CATCTCTTGAC-GAGTGGCTGTAT-AACGGTGGTCCTTTCCAACTTGTAGTATTCCACTT 157983 | || |||| || ||| | || || ||||| |||| |||| | | |||||||| || Sbjct 37272 CTTCAGTTGAAAGAATGGTTATACCAATGGTGG-CCTTACCAATTAATCGTATTCCATTT 37330 Query 157984 CCTGATCGG--CATCTATGCCTATATGGGACGTGAGTGGGAA-CTCTCTTACCGT--TTA 158038 | | || || | ||| || | ||||| ||||| |||||| || ||| || ||| Sbjct 37331 CTTAATTGGTGCTTCT-TGT-TGGATGGGTCGTGAATGGGAAACTTAGCTACGGTGTTTA 37388 Query 158039 GGTATGCGCCCATGGATCTGT-GTAGCATATTCTGCTCCAGTCG-CTGCAGCGAGTGCAG 158096 |||||||| || | ||| | | ||||||| |||| || ||| | | ||||| ||| | Sbjct 37389 GGTATGCGTCC-TTGATGTTTCGTAGCATTCTCTG-TCAAGTAGACAGCAGC-TCTGCGG 37445 Query 158097 TATTCCTAGTCTATCCTTTCGGTCAA-GGTTCTTTCT-CCGATGCTATGCCTCTTGGTAT 158154 |||| ||| | || |||| | |||| ||| ||||| | || | ||||| | |||||| Sbjct 37446 TATT-CTAATTTACCCTTCGGATCAATGGTAGTTTCTGCTGACGGTATGCTTTATGGTAT 37504 Query 158155 --CTCTGGTA-CTTTTAACTACATGCT-TGTATTCC--AAGC-AGAACACAACATCCTTA 158207 ||||||| | ||||||| |||| | || |||| |||| ||||| ||| | | | Sbjct 37505 TGTTCTGGTAGCATTTAACTTCATGATCGGTTTTCCAAAAGCTCGAACATAAC-TTTTAA 37563 Query 158208 TGCACCCG--TTCCAT-ATGCTCGGTGTTGCTGG-GGTATTCGGTGGATCTCTTTTCTCT 158263 |||||| | |||||| ||| ||||||||||| || ||| |||| | | | || | Sbjct 37564 TGCACCTGGATTCCATAATGGCTGGTGTTGCTGGATGTTTTC-GTGGTTATTATATCAGT 37622 Query 158264 GCTAT-GCATGG-AAGTCTCGTTACTTCCTCACTCGTTCGTGAAACG-ACTGAAACAGAG 158320 ||||| |||||| ||| | || ||| | | ||||||||| | |||| || Sbjct 37623 GCTATCGCATGGTTCTTCTAG-TAATTCAAGTTTAATACGTGAAACGAAGTGAAGTTGAA 37681 Query 158321 TCACAGAACTACGGTTA-TAAGTTCGGTCA-AGA-AGAAGAGACCTACAACATCGTTGCA 158377 || || |||||||| || ||||| || ||| |||||| || |||||||| || || Sbjct 37682 TCTGTTAA-TACGGTTACAAAATTCGGACAGAGATAGAAGAAACTTACAACATTGTAGCT 37740 Query 158378 GCCCAT-GGCTACTTCGG--TCGTTTGATCTT--CCAATA--CGCTTCATT-CAACA-AC 158428 || ||| || ||||| || ||||| ||||| || || ||| || ||||| || Sbjct 37741 GCACATAGGTTACTTTGGGTGCGTTTAATCTTGCGCAGTAGCAGCTAGTTTACAACAGAC 37800 Query 158429 TCCCG-TTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGC 158487 || | | || || ||||||||||| |||||||||| || || || ||||| || || Sbjct 37801 TCTAGAGGCTTTACATTTCTTCCTTGC-GCATGGCCTGAAGTTGGGATTTGGTTAACAGC 37859 Query 158488 CCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCT 158547 | || || | || |||||||| ||| | || ||||| | ||| |||||||| | | Sbjct 37860 TTTAGGTGT-TGTACTATGGCATTTAACTTAAATGGTTT-AGCTTTAACCAGTCTGTTGT 37917 Query 158548 TGATGGT-CAGGGTCGTGTGTTGAACACCTGGGCAGA 158583 ||| || | |||||||| || | || ||||| || Sbjct 37918 AGATAGTAGAAGGTCGTGTATTAACGACATGGGCTGA 37954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572928541364400