Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1406 100 3e-16 >seq1406 Length=118068 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 104211 TGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA 104270 || |||| | || ||| ||||| ||||||||||| | | || || || ||| ||| Sbjct 75060 TGGTGGAGAGGCCGCAGCACATGATCATGCGCGTGTCGGTGGGCATCCACAAGGAGAACA 75119 Query 104271 TTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACAC 104330 | || ||| | ||||| |||||| |||||||| | | |||| ||||| || | Sbjct 75120 TCGACAAGGTCATCGAGACGTACGACCTCATGTCCCAGCGGCTCTTCACCCACGCCACGC 75179 Query 104331 CAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCA 104390 | ||||||||||| || || || || | || || ||||| || |||||||| || ||| Sbjct 75180 CGACCCTCTTCAACGCCGGCACCCCCAAGCCGCAGATGTCGAGCTGCTTCCTGCTCACCA 75239 Query 104391 ACAAGGAGGACTCAATCAACGGTATCTA 104418 ||||||||| ||| ||| ||||| Sbjct 75240 TGAAGGAGGACAGCATCTCCGGGATCTA 75267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583163636041480