Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq76 116 3e-21 >seq76 Length=624063 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || || || || || ||| | || ||||| || || || || Sbjct 335380 CGGCATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACTCTGGACGTCGAGCC 335439 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 ||||||| |||| || || || || || || || ||||| || ||||| || ||||| Sbjct 335440 GTCCGACACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 335499 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || |||||| | || | ||| || || || |||| ||| | || | || || || Sbjct 335500 CCAGCAGCGTCTCATCTTCGCGGGGAAGCAGCTGGAGGACGGCCGCACGCTGTCGGACTA 335559 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||||||||| ||| | || | || | || | || |||||||| Sbjct 335560 CAACATCCAAAAGGAGTCCACCCTCCACCTTGTGCTTCGCCTTCGCGGTGGCAT 335613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434845948031040