Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq76 118 9e-22 seq194 105 6e-18 >seq76 Length=624063 Score = 118 bits (130), Expect = 9e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | |||||| || || ||| ||| || || || || || || | || || || | Sbjct 333865 GCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 333806 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || ||||| || || |||||||||||||||| ||| | || ||| || Sbjct 333805 GTCCTCCAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTT 333746 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| ||| || ||| ||||||| |||| Sbjct 333745 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCGGACGGCTCGACGTCCAGAGTGA 333687 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 333686 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 333650 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| |||| ||||| | |||||| || || ||| ||| || || || || || || Sbjct 334108 CATGCCACCTCGCAAGCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 334049 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 | || || || |||| || ||||| || ||||| || || | ||||||||||||| Sbjct 334048 CGACAGCGTGCGGCCGTCCTCCAGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCGGG 333989 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 ||| | || ||| |||||| ||| ||||| || | || || | | ||| ||| || || Sbjct 333988 GGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCGGACGGCT 333930 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||| ||||| | || ||||| || || || || ||||| ||||| Sbjct 333929 CGACATCCAGAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 333878 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| ||||| || || || || | || || || | Sbjct 335599 GCGAAGCACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCCGACAGCGTGCGGCC 335540 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || ||||| || || |||||||||||||||| ||| | || ||| || Sbjct 335539 GTCCTCCAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTT 335480 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| ||| || ||| ||||||| |||| Sbjct 335479 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCGGACGGCTCGACGTCCAGAGTGA 335421 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 335420 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 335384 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| |||| ||||| | |||||| || || ||| ||| || || || || || || Sbjct 336070 CATGCCACCTCGCAAGCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 336011 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 | || || || |||| || | ||| || |||||||| || |||||||||||||||| Sbjct 336010 CGACAGCGTGCGGCCGTCCTCCAACTGCTTCCCCGCAAAGATGAGACGCTGCTGGTCGGG 335951 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 ||| | || || |||||| ||| ||||| || | || || | | || ||| || || Sbjct 335950 GGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCA-CGCCGTCGATTGTGTCGGACGGCT 335892 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||| ||||| | || ||||| || || || || ||||| ||||| Sbjct 335891 CGACATCCAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 335840 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 333181 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 333122 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || ||||| || || |||||||||||||||| ||| | || ||| || Sbjct 333121 GTCCTCCAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTT 333062 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| ||| || ||| ||||||| |||| Sbjct 333061 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCGGACGGCTCGACGTCCAGAGTGA 333003 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 333002 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 332966 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 333409 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 333350 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || ||||| || || |||||||||||||||| ||| | || ||| || Sbjct 333349 GTCCTCCAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTT 333290 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| ||| || ||| ||||||| |||| Sbjct 333289 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCGGACGGCTCGACGTCCAGAGTGA 333231 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 333230 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 333194 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 333637 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 333578 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || ||||| || || |||||||||||||||| ||| | || ||| || Sbjct 333577 GTCCTCCAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTT 333518 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| ||| || ||| ||||||| |||| Sbjct 333517 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCGGACGGCTCGACGTCCAGAGTGA 333459 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 333458 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 333422 Score = 107 bits (118), Expect = 2e-18 Identities = 171/245 (70%), Gaps = 8/245 (3%) Strand=Plus/Minus Query 39044 AAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTA 39103 ||| ||| | || ||| || | | ||| | |||||| || || ||| ||| || || | Sbjct 338811 AAACTTTTTACATGCCACCGCGAAGGCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGA 338752 Query 39104 TATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCT 39163 | || || || | || || || |||| || | ||| || |||||||| || ||||||| Sbjct 338751 TGTTGTAGTCCGACAGCGTGCGGCCGTCCTCCAACTGCTTCCCCGCAAAGATGAGACGCT 338692 Query 39164 GCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACC---- 39219 ||||||||| ||| | || || |||||| ||| ||||| || | ||||| | Sbjct 338691 GCTGGTCGGGGGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCA----CGCCATCGATT 338636 Query 39220 GTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATT 39279 || ||| || ||| || |||| ||||| | || ||||| || || || || ||||| Sbjct 338635 GTGTCGGACGGCTCGACATCCAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATC 338576 Query 39280 TGCAT 39284 ||||| Sbjct 338575 TGCAT 338571 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 334321 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 334262 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || ||||| || || | ||||||||||||| ||| | || ||| || Sbjct 334261 GTCCTCCAGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 334202 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| ||| || ||| || |||| |||| Sbjct 334201 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCGGACGGCTCGACATCCAGAGTGA 334143 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 334142 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 334106 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 334549 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 334490 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || ||||| || || | ||||||||||||| ||| | || ||| || Sbjct 334489 GTCCTCCAGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 334430 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| || || ||| || |||| |||| Sbjct 334429 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCAGACGGCTCGACATCCAGGGTGA 334371 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 334370 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 334334 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || || | || || || |||| || | ||| || ||||| || || Sbjct 336255 TTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCCAACTGCTTCCCCGCGAAGATG 336196 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-C 39215 |||||||||||||||| ||| | || ||| |||||| ||| ||||| || | || || | Sbjct 336195 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGCCGTC 336137 Query 39216 CACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAA 39275 | || ||| || ||| || |||| ||||| | || ||||| || || || || || Sbjct 336136 GATTGTGTCGGACGGCTCGACATCCAGAGTGATCGTCTTACCCGTGAGGGTCTTGACGAA 336077 Query 39276 GATTTGCAT 39284 ||| ||||| Sbjct 336076 GATCTGCAT 336068 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 337874 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 337815 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || ||||| || || | ||||||||||||| ||| | || ||| || Sbjct 337814 GTCCTCCAGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 337755 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| || || ||| || |||| |||| Sbjct 337754 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCAGACGGCTCGACATCCAGGGTGA 337696 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 337695 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 337659 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/220 (69%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 335827 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 335768 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || | ||| || ||||| || || |||||||||||||||| ||| | || || || Sbjct 335767 GTCCTCCAACTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCTTCCTT 335708 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACC----GTATCGCTCGACTCCACGTCCACCG 39244 |||| ||| ||||| || | ||||| | || ||| || ||| || |||| | Sbjct 335707 GTCCTGGATCTTCTGCTTCA----CGCCATCGATTGTGTCGGACGGCTCGACATCCAGGG 335652 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| | || ||||| || || || || ||||| ||||| Sbjct 335651 TGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 335612 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/220 (69%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 338102 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 338043 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || | ||| || ||||| || || |||||||||||||||| ||| | || || || Sbjct 338042 GTCCTCCAACTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCTTCCTT 337983 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACC----GTATCGCTCGACTCCACGTCCACCG 39244 |||| ||| ||||| || | ||||| | || ||| || ||| || |||| | Sbjct 337982 GTCCTGGATCTTCTGCTTCA----CGCCATCGATTGTGTCGGACGGCTCGACATCCAGGG 337927 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| | || ||||| || || || || ||||| ||||| Sbjct 337926 TGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 337887 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/220 (69%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 338330 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 338271 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || | ||| || ||||| || || |||||||||||||||| ||| | || || || Sbjct 338270 GTCCTCCAACTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCTTCCTT 338211 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACC----GTATCGCTCGACTCCACGTCCACCG 39244 |||| ||| ||||| || | ||||| | || ||| || ||| || |||| | Sbjct 338210 GTCCTGGATCTTCTGCTTCA----CGCCATCGATTGTGTCGGACGGCTCGACATCCAGGG 338155 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| | || ||||| || || || || ||||| ||||| Sbjct 338154 TGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 338115 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/220 (69%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 338558 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 338499 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || | ||| || ||||| || || |||||||||||||||| ||| | || || || Sbjct 338498 GTCCTCCAACTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCTTCCTT 338439 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACC----GTATCGCTCGACTCCACGTCCACCG 39244 |||| ||| ||||| || | ||||| | || ||| || ||| || |||| | Sbjct 338438 GTCCTGGATCTTCTGCTTCA----CGCCATCGATTGTGTCGGACGGCTCGACATCCAGGG 338383 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| | || ||||| || || || || ||||| ||||| Sbjct 338382 TGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 338343 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 332953 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCC 332894 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| |||||||| || ||||| || || | ||||||||||||| ||| | || ||| || Sbjct 332893 GTCCTCAAGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 332834 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 ||| ||| ||||| || | || || | | || || | |||||||||| |||| Sbjct 332833 GTCTTGGATCTTCTGCTTCA-CGCCGTCGATGGTGTCCGATGGTTCCACGTCCAAGGTGA 332775 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 332774 TTGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 332738 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 ||||| || || || || | || || || |||| || | ||| || ||||| || || Sbjct 334749 TTTTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCCAACTGCTTCCCCGCGAAGATC 334690 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-C 39215 | ||||||||||||| ||| | || ||| |||||| ||| ||||| || | || || | Sbjct 334689 AAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGCCGTC 334631 Query 39216 CACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAA 39275 | ||| || || ||| || |||| ||||| | || ||||| || || || || || Sbjct 334630 GATCGTGTCAGACGGCTCGACATCCAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAA 334571 Query 39276 GATTTGCAT 39284 ||| ||||| Sbjct 334570 GATCTGCAT 334562 >seq194 Length=468613 Score = 105 bits (116), Expect = 6e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || || | || || || | Sbjct 405025 GCGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCC 405084 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || |||||||||||||||| || | || ||| || Sbjct 405085 GTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 405144 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| || | ||||||||||| |||| Sbjct 405145 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCCGAGGGCTCCACGTCCAAGGTGA 405203 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 405204 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 405240 Score = 105 bits (116), Expect = 6e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || || | || || || | Sbjct 405253 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCC 405312 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || |||||||||||||||| || | || ||| || Sbjct 405313 GTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 405372 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| || | ||||||||||| |||| Sbjct 405373 GTCCTGGATCTTCTGCTTTA-CGCCGTCGATCGTGTCCGAGGGCTCCACGTCCAAGGTGA 405431 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 405432 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 405468 Score = 105 bits (116), Expect = 6e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || || | || || || | Sbjct 408274 GCGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCC 408333 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || |||||||||||||||| || | || ||| || Sbjct 408334 GTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 408393 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| ||| || ||| ||||| | |||| Sbjct 408394 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCGGACGGCTCAACGTCAAGGGTGA 408452 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 408453 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 408489 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || |||| || || || | Sbjct 403552 GCGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 403611 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || |||||||||||||||| || | | ||| || Sbjct 403612 GTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGCGGGATACCCTCCTT 403671 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| || | |||||| |||| |||| Sbjct 403672 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCCGAGGGCTCCACATCCAGAGTGA 403730 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 403731 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 403767 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || | || || || | Sbjct 403096 GCGAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCC 403155 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || |||||||||||||||| || | || ||| || Sbjct 403156 GTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 403215 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| || | |||||| |||| |||| Sbjct 403216 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCCGAGGGCTCCACATCCAGGGTGA 403274 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 403275 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 403311 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || ||||| ||| || || || || || || | || || || | Sbjct 403780 GCGGAGCACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCC 403839 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || |||||||||||||||| || | || ||| || Sbjct 403840 GTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 403899 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| || | || ||||||| |||| Sbjct 403900 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCCGAGGGTTCGACGTCCAAGGTGA 403958 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 403959 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 403995 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || || | || || || |||| || ||||| ||||| || || || Sbjct 405936 TTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 405995 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-C 39215 |||||||||||||||| || | || ||| |||||| ||| ||||| || | || || | Sbjct 405996 AGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGCCGTC 406054 Query 39216 CACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAA 39275 | ||| || | |||||| |||| ||||| | || ||||| || || || || || Sbjct 406055 GATCGTGTCCGAGGGCTCCACATCCAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAA 406114 Query 39276 GATTTGCAT 39284 ||| ||||| Sbjct 406115 GATCTGCAT 406123 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 ||||| || || || || | || || || |||| || ||||| ||||| || || || Sbjct 407846 TTTTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 407905 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-C 39215 | ||||||||||||| || | || ||| |||||| ||| ||||| || | || || | Sbjct 407906 AACCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGCCGTC 407964 Query 39216 CACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAA 39275 | ||| || | |||||| |||| ||||| | || ||||| || || || ||||| Sbjct 407965 GATCGTGTCCGAGGGCTCCACATCCAGAGTGATCGTCTTACCCGTGAGGGTCTTGACAAA 408024 Query 39276 GATTTGCAT 39284 ||| ||||| Sbjct 408025 GATCTGCAT 408033 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| |||| || || | || | || || ||| ||| || || || || || || Sbjct 408031 CATGCCGCCTCGCAATCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 408090 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 | || || || |||| || ||||| ||||| || || || |||||||||||||||| Sbjct 408091 CGACAGGGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGG 408150 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 || | || ||| |||||| ||| ||||| || | || || | | ||| || | | Sbjct 408151 CGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCA-CGCCGTCGATCGTGTCCGAGGGTT 408209 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||||| ||||| | || ||||| || || || || ||||| ||||| Sbjct 408210 CGACGTCCAAGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 408261 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || || | || || || | Sbjct 406136 GCGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 406195 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || | ||||||||||||| || | || || || Sbjct 406196 GTCCTCCAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCGGGCGGGATGCCTTCCTT 406255 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | ||| || | |||||| |||| |||| Sbjct 406256 GTCCTGGATCTTCTGCTTTA-CGCCGTCGATCGTGTCCGAGGGCTCCACATCCAGGGTGA 406314 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 406315 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 406351 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || || | || || || | Sbjct 403324 GCGAAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACC 403383 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || || || || || |||||||||||||||| || | || ||| || Sbjct 403384 GTCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGGATGCCCTCCTT 403443 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| || | || || | | || || | || || |||| |||| Sbjct 403444 GTCCTGGATCTTCTGCTTCA-CGCCGTCGATAGTGTCCGAGGGTTCGACATCCAAGGTGA 403502 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 403503 TCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 403539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429475831995551