Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq731 114 1e-20 >seq731 Length=224370 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27217 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 27276 || ||||||| || ||| || || | |||| |||||||| || || ||||| | Sbjct 89586 ACCTGAGCCACCAGCCGCGTCAGCAGCGCGTAGGATGCGATGTTGAACGGCACCCCCAAG 89527 Query 27277 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCAT-CGCTTACGTAAAA 27335 |||||||| | | |||||| | ||| ||||| |||||||| | ||| ||||| || Sbjct 89526 CCCATGTCGGCGCTTCGCTGGTACATCTGGCACGACAGCTCTCCGTTCGCC-ACGTAGAA 89468 Query 27336 CTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGC 27395 ||| || | ||||||||| || || ||||| ||| | ||| || ||||||||||| Sbjct 89467 CTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTTGCCGAGGTCCTTCGGGTTCCAGGC 89408 Query 27396 GCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTG 27432 | | | ||||||||||||||| ||||| ||||| Sbjct 89407 CGAGAGCACGATGCGCCTGTCTTCGGGGTTCGTCCTG 89371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369447183601337