Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq12292 129 2e-25 >seq12292 Length=560 Score = 129 bits (142), Expect = 2e-25 Identities = 182/256 (71%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 33988 CCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTGA 34047 |||||||||||||| ||| || | || || ||||| | || | ||| | Sbjct 294 CCGTTGCGGTGCTTGCCGACAATGATGTCGACCTCGCCGGCCCTCGGGCTTTCCTTCTCG 235 Query 34048 TAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGAC 34107 ||| | ||||| ||||||| || |||| || ||| |||||||||||||||| |||||| Sbjct 234 TAGGCGTCGTCGCGGTACAGGAGGATGACCATGTCCGCGTCCTGCTCGATCGAGCCGGAC 175 Query 34108 TCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGC 34167 || || |||||||| | | ||| ||||||| | |||| ||| | |||||||||| Sbjct 174 TCACGAAGGTCCGAGACCTGCGGCCGCTTGTCTGCCCGCATTTCCGGCCCGCGGTTGAGC 115 Query 34168 TGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAGTAGCTTGCACTGGCGGGAC 34227 ||||| |||| ||| | || | |||||| | ||||| |||||| | ||||| Sbjct 114 TGCGAGAGCAGGATGATCGGCAGCTGGAGCTCCTTCGCCAGCAGCTTGAGGTTTCGGGAG 55 Query 34228 ATGTCGCTGACGTCCT 34243 ||| |||||| |||| Sbjct 54 ATGCTGCTGACCTCCT 39 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160438605268230