Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq3998 113 9e-21 seq6597 109 1e-19 >seq3998 Length=11755 Score = 113 bits (124), Expect = 9e-21 Identities = 73/79 (92%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 2854 GGGC-CTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGA 2912 |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct 1930 GGGCACTATAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCCTGGTTCGA 1871 Query 2913 GTCCGTGTGGGCCCACCAC 2931 |||| ||||||||||||| Sbjct 1870 GTCCAGGTGGGCCCACCAC 1852 >seq6597 Length=2484 Score = 109 bits (120), Expect = 1e-19 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913 |||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||| Sbjct 1883 GGGCCTATAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCCCAGGTTCGAG 1942 Query 2914 TCCGTGTGGGCCCACCACCT---TCAAAGCC 2941 ||| |||||||||||| | |||||||| Sbjct 1943 TCCTGGTGGGCCCACCATATAAATCAAAGCC 1973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104300291018826