Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq2944 86.0 9e-12 >seq2944 Length=26024 Score = 86.0 bits (94), Expect = 9e-12 Identities = 172/251 (69%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 99202 AGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCA 99261 |||||||||||| || || || | |||| || |||| |||||||| ||| |||| Sbjct 9783 AGACCGTACGGGCACAGGCACGCGCAGCGTTTTTGGCTACCAAATGCGTTTTAATTTGCA 9842 Query 99262 AGAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTATTCACGAACT 99321 |||||| || ||||| || | ||||| |||| | || || || ||||| | Sbjct 9843 AGAAGG-TTCCCGCTTATATCTACTAAAAAAGTTCACCTAAAATCTATAATACACGAGTT 9901 Query 99322 GCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACTAT 99381 ||||||| | ||||| ||||| ||| | || || | || |||||| ||| | | Sbjct 9902 ATTGTGGTT-TTTAAAGGAGATACTAATATTAAGTACCTTAAAGATAATAATGTTA-GAA 9959 Query 99382 TTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGGCG 99441 ||||||||||||| | || |||| || | || || |||||||| | || ||||| Sbjct 9960 TTGGGACGAATGGGCCGATGAAAATGGAGATTTAGGGCCTGTATACGGACACCAATGGCG 10019 Query 99442 GTCTTGGCCTG 99452 ||||||| Sbjct 10020 CAACTGGCCTG 10030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716344646053400