Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq2944 89.7 8e-13 >seq2944 Length=26024 Score = 89.7 bits (98), Expect = 8e-13 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 202548 AGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGAC 202607 ||||||||| ||||| ||||||||| | | || || ||| ||||| ||| | || Sbjct 9783 AGACCGTACGGGCACAGGCACGCGCAGCGTTTTTGGCTACCAAATGCGTTTTAATTTGCA 9842 Query 202608 CGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCT 202667 ||||| ||||| || | | || ||||| |||||||| ||||| || |||||| | Sbjct 9843 AGAAGG-TTCCCGCTTATATCTACTAAAAAAGTTCACCTAAAATCTATAATACACGAGTT 9901 Query 202668 GCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTAT 202727 ||||||| | ||||| || || || || | ||||| || ||||| || | || Sbjct 9902 ATTGTGGTTTTT-AAAGGAGATACTAATATTAAGTACCTTAAAGATAATAATGTTAGAAT 9960 Query 202728 CTGGGACGAATGGGC 202742 |||||||||||||| Sbjct 9961 -TGGGACGAATGGGC 9974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788188675742000