Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq3525 113 5e-20 seq2601 93.3 4e-14 >seq3525 Length=15692 Score = 113 bits (124), Expect = 5e-20 Identities = 73/80 (91%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 66402 ATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATC 66461 ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 8139 ATGGCACGCCCGGCAGGATTCGAACCTGGGACCTACGGCTTAGAAGGCCGTTGCTCTATC 8080 Query 66462 CAGCTGAGCTAAGAGTGCAT 66481 ||||||||||| | | |||| Sbjct 8079 CAGCTGAGCTATGGGCGCAT 8060 >seq2601 Length=37044 Score = 93.3 bits (102), Expect = 4e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 66412 CTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAGCT 66471 |||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||||| Sbjct 14895 CTACAGGATTCGAACCTGTGACCTACAATTTAGAAGACTGTTGCTCTATCCAACTGAGCT 14954 Query 66472 AAGAGTGCATT 66482 |||| || ||| Sbjct 14955 AAGAATGTATT 14965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522028222134120