Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq731 96.9 2e-15 >seq731 Length=224370 Score = 96.9 bits (106), Expect = 2e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 1193 GACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGAC 1252 |||||| || | ||||| || | |||||||||||| | | |||| | ||||| | || Sbjct 89423 GACCTCGGCAAGATGGCCCTGCCCCCGTGCCACATGTTCTGCCAGTTCTACGTGGCGAAC 89482 Query 1253 GGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTC 1312 || ||| ||| ||| | |||||||| ||||| |||||| | | || ||||||||| Sbjct 89483 GGAGAGCTGTCGTGCCAGATGTACCAGCGAAGCGCCGACATGGGCTTGGGGGTGCCGTTC 89542 Query 1313 AATATCGCCTCGTACGCGCTCCT 1335 || ||||| || |||||||| || Sbjct 89543 AACATCGCATCCTACGCGCTGCT 89565 Score = 93.3 bits (102), Expect = 2e-14 Identities = 155/221 (70%), Gaps = 5/221 (2%) Strand=Plus/Plus Query 806 GACATCCTGGAGACTGGCAAGTCGA-AGGATGATCGCACCGGCACCGGCACGCTGAGCAA 864 ||||||||||| | ||| | | |||| || ||||| || ||||| ||||| ||| Sbjct 85650 GACATCCTGGACAACGGCGTGCGCAGAGGA-GACCGCACGGGAACCGGAACGCTATCCAA 85708 Query 865 GTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGG---GCTTCCCGCTGGTCACCACGAA 921 ||| || | |||| |||||| | ||| ||| ||||||||||| | |||||||| Sbjct 85709 GTTTGGGGTCCAGATGCGGTTCAGCCTGCGGCAGGACCGCTTCCCGCTGTTGACCACGAA 85768 Query 922 GCGCGTCCACTTCAAATCGGTTGCGTACGAACTTCTGTGGTTCCTCAGTGGCGACACGAA 981 |||||| || ||| ||| | || || ||||||||| || || |||||| Sbjct 85769 GCGCGTTTTCTGGCGCGGGGTGGCGGAGGAGCTGCTGTGGTTCGTCTCGGGGTGCACGAA 85828 Query 982 CGTGAAGGCGCTCAACGACAACGGCGTCACCATCTGGGACG 1022 || ||| | ||| || |||| ||| || ||||||||||| Sbjct 85829 CGCGAACGTGCTGAAGGACAGGGGCATCCACATCTGGGACG 85869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296083101537627