Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945.
1_202015-01-15] 322 sequences; 39,089,698 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq91 150 2e-31
>seq91
Length=99162
Score = 150 bits (166), Expect = 2e-31
Identities = 490/743 (66%), Gaps = 26/743 (3%)
Strand=Plus/Minus
Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596
|| || | ||| ||||| ||||| | ||| || | ||||||| | ||| ||| |||
Sbjct 43261 TACACAGACATTTCCATCTTGATGGTCTTGTGTGGCTTGTAGCCCACGAGCTCAAGATCC 43202
Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAG----GATCCTGAGCCTGGGAAA 145652
|| | ||||| |||| ||||| | |||| |||| ||||| | |||||
Sbjct 43201 TCGTACTTGAAGCCATCAATGTC----AGTGTTGTCAGTGTTGATCTTGAGCGTAGGAAA 43146
Query 145653 GGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTG 145712
||| ||||| | || ||| || || ||||| ||||| || ||| | |||
Sbjct 43145 GGGGCGGGGTTCACGCAACAACTGCTCTTTGAGCGGCTCGACGTGATTTTTGTAAATGTG 43086
Query 145713 CGCGTCCCCCAGGACGTGGATGAAGTC-CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCA 145771
||| || | ||||| ||||| || |||| || | || || ||| | || | |
Sbjct 43085 ACAGTCGCCAATCACGTGAATGAATTCGCCCGCGCGCAAG-CCTGTGCACTTTGCAAGGA 43027
Query 145772 TGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCG 145831
|| || |||| || |||| ||| ||||| |||||||| || || || ||||| || |
Sbjct 43026 GGTGCGTGAGCAAGGCGTAGGAGGCAATGTTAAAGGGCACGCCAAGACCAATGTCACCAG 42967
Query 145832 AGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTG-GCACAGGAGG 145890
| |||||||||| ||||| || ||||| || | || |||||||| ||| | | |
Sbjct 42966 AACGCTGGTACATTTGGCACGAAAGCTCGCCCTTGGAAACATAGAACTGAGCAAAC-ATG 42908
Query 145891 TGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGC 145950
||||||||||| || ||||| | | | | ||||||||||| || | ||||| |
Sbjct 42907 TGGCAGGGCGGAAGCGCCATAAGGTGAAAAGCAGCCGGGTTCCACGCCGAGAGGATCATG 42848
Query 145951 CTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCC 146009
| | | || | |||||| |||| ||| | || | | |||||||| || ||
Sbjct 42847 CGAC-GATCGTTGGGGTTGGTCTTAATCGTGTGCACGAGCTGCGCAAGCTGGTCGACACC 42789
Query 146010 CTGCCCCCGGTAATCTGTCTTGGA--GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGG 146067
|| ||| ||| || || || | || ||| | || || ||||||| ||||||
Sbjct 42788 CTTGCCCGAGTAGTC-ATCGTGCATCGT-TGTGTAGTCCGCACCAAAGTGCCGCCACTGA 42731
Query 146068 AACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGG 146127
|| || |||||||| || ||||| || ||| | || || ||| | | ||||
Sbjct 42730 AAACCATAGACGGGGCCGAGGTCGCCTTCCTCTCGGTCTGTGAGGCCGATCTTGTCGAGA 42671
Query 146128 AAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACG--CCCCTCGCGGAGAGCTCATTGG 146185
| || |||||||| ||| | ||||| || | || | | || | || | || ||||
Sbjct 42670 TATTCACGGGACCCATTGCCATCCCAAATGTGGATGTTCTTTTCTTGCAGTG-TC-TTGG 42613
Query 146186 AGTCCGTGGACCCCCTG--ATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGAC 146243
| |||| | |||| |||||||| || ||||| ||| ||| || | ||| |||||
Sbjct 42612 CGCTCGTG--TCGCCTGACATGAACCAAAGAAGCTCCTCGGCGACGCCGCGCCAAAAGAC 42555
Query 146244 CCTCTTGGTGGTCAGCAGGGGGA 146266
| ||| || || || || ||||
Sbjct 42554 GCGCTTCGTCGTGAGAAGCGGGA 42532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590074424940880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |