Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945.
1_202015-01-15] 322 sequences; 39,089,698 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq91 105 1e-17
>seq91
Length=99162
Score = 105 bits (116), Expect = 1e-17
Identities = 365/558 (65%), Gaps = 16/558 (3%)
Strand=Plus/Plus
Query 35152 CGATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAA--ATGAGGTTCTCTCTT 35209
|||| | ||||| || || ||| | || | ||||| | ||| ||| | ||| |||
Sbjct 42461 CGATCGCACTGGCACTGGCACTTTGTCAACCTTTGG--CACAACGATGCGCTTCAGCCTT 42518
Query 35210 CGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAA 35269
|| ||||||| || || ||||||| || ||| | || ||| | || || | ||
Sbjct 42519 CGTAACGACACCATCCCGCTTCTCACGACGAAGCGCGTCTTTTGGCGCGGCGTCGCCGAG 42578
Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAA--GAAGA 35327
|| || |||||||| ||| | || |||||| | || |||||| ||| |
Sbjct 42579 GAGCTTCTTTGGTTCATGTCAGGCGACACGAGCGCCAAGACACTG--CAAGAAAAGAACA 42636
Query 35328 TACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387
| ||||| ||| | | |||||||| || |||| | | |||| | || | ||
Sbjct 42637 TCCACATTTGGGATGGCAATGGGTCCCGTGAATATCTCGACAAGATCGGCCTCACAGACC 42696
Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447
||| || || || | || ||||| || || || || ||||| || |||||||| || |
Sbjct 42697 GAGAGGAAGGCGACCTCGGCCCCGTCTATGGTTTTCAGTGGCGGCACTTTGGTGCGGACT 42756
Query 35448 ATGATACCTGTTCTTCCGATTA-TACT--GGAAAGGGTATTGATCAATTGGCCAATATAC 35504
| | | | | | |||| | |||| || |||||| | || || | || | |
Sbjct 42757 AC-ACAACGATGCA--CGATGACTACTCGGGCAAGGGTGTCGACCAGCTTGCGCAGCTCG 42813
Query 35505 TAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCT 35563
| | || | | ||| || || | ||| | | ||||| | |||| ||||| ||
Sbjct 42814 TGCACACGATTA-AGACCAACCCCAACGATCGTCGCATGATCCTCTCGGCGTGGAACCCG 42872
Query 35564 ATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCT 35623
| | ||||||||||||| ||||| || ||||||||| |||||| || ||||| |
Sbjct 42873 GCTGCTTTTCACCTTATGGCGCTTCCGCCCTGCCACATGTTTGCTCAGTTCTATGTTTCC 42932
Query 35624 AATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCC 35683
|| || || | |||||||| |||| ||||| || || | || | |||||||||
Sbjct 42933 AAGGGCGAGCTTTCGTGCCAAATGTACCAGCGTTCTGGTGACATTGGTCTTGGCGTGCCC 42992
Query 35684 TTCAATATTGCATCATAC 35701
|| || ||||| || |||
Sbjct 42993 TTTAACATTGCCTCCTAC 43010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989579917347510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |