Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945.
1_202015-01-15] 322 sequences; 39,089,698 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq30 93.3 3e-14
>seq30
Length=443502
Score = 93.3 bits (102), Expect = 3e-14
Identities = 111/147 (76%), Gaps = 3/147 (2%)
Strand=Plus/Minus
Query 22747 TTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCATATTCTG 22805
||||| ||||| || || |||||| || | |||||||| || || |||| | || || ||
Sbjct 288511 TTGGC-TTTGCCGCCGTGGAAGGCATCTTCTTTTCTGGCTCTTTCTGCG-CGATCTTTTG 288454
Query 22806 GCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGA 22865
||| ||||| || |||||||| || | | |||||||||||| | || ||||| ||
Sbjct 288453 GCTCAAGAAGCGCGGCCTCATGCCGGGCCTCACCTTTTCCAACGAGCTCATCAGCCGCGA 288394
Query 22866 CGAAGGTCTACACTGTGACTTTGCTTG 22892
||| || | ||| ||||||||||||
Sbjct 288393 CGAGGGCATGCACACTGACTTTGCTTG 288367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356232202005766
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |