Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945.
1_202015-01-15] 322 sequences; 39,089,698 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq92 104 2e-17
>seq92
Length=98443
Score = 104 bits (114), Expect = 2e-17
Identities = 120/162 (74%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGC 5653
||||| || || |||||||| ||| ||||||| || | || | ||| || ||
Sbjct 83329 AGCTGTGCGATGCGGTCGCCGACCTTGACCTCGAGGTCCTCCTGAGCATGGTTAAAGAGG 83270
Query 5654 ACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAG 5713
|| ||||| |||||||||||||| ||| || |||||||| ||||||||||||| |
Sbjct 83269 ACAACGCCAACGTTGCCGCGGTAATCGCGATCGATCACGCCGGCGCCCACGTCGACGTGC 83210
Query 5714 TGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAG 5755
| ||| ||| || || ||||| || |||||||| ||||||
Sbjct 83209 TTCTTCCACGCGAGCCCCGAGCGCGGCGCCACGCGCCCGTAG 83168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430052712305264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |