Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945. 1_202015-01-15] 322 sequences; 39,089,698 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq92 104 2e-17 >seq92 Length=98443 Score = 104 bits (114), Expect = 2e-17 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGC 5653 ||||| || || |||||||| ||| ||||||| || | || | ||| || || Sbjct 83329 AGCTGTGCGATGCGGTCGCCGACCTTGACCTCGAGGTCCTCCTGAGCATGGTTAAAGAGG 83270 Query 5654 ACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAG 5713 || ||||| |||||||||||||| ||| || |||||||| ||||||||||||| | Sbjct 83269 ACAACGCCAACGTTGCCGCGGTAATCGCGATCGATCACGCCGGCGCCCACGTCGACGTGC 83210 Query 5714 TGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAG 5755 | ||| ||| || || ||||| || |||||||| |||||| Sbjct 83209 TTCTTCCACGCGAGCCCCGAGCGCGGCGCCACGCGCCCGTAG 83168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430052712305264