Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945.
1_202015-01-15] 322 sequences; 39,089,698 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq7 95.1 8e-14
>seq7
Length=852142
Score = 95.1 bits (104), Expect = 8e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
|| || || ||||| ||||| || || ||||| || |||||||| ||||| || |||||
Sbjct 76959 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTA 76900
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737
|| || ||||| || ||||| |||||||| || | | |||||||| ||
Sbjct 76899 TCCTGGATCTTCTGCTTGACGTTCTCAATAGTGTCCGAAGGCTCGACATCAAGGGTGATG 76840
Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || ||||| ||||||||||| || ||
Sbjct 76839 GTTTTGCCCGTGAGGGTCTTAACGAAGATCTG 76808
Score = 89.7 bits (98), Expect = 3e-12
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
|| || || ||||| ||||| || || ||||| || |||||||| || || || |||||
Sbjct 77187 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGATACCCTCCTTA 77128
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737
|| |||||||| || ||||| ||||| || || | | |||||||| ||
Sbjct 77127 TCCTGAATCTTCTGCTTGACGTTCTCAATGGTGTCCGAAGGCTCGACATCAAGGGTGATG 77068
Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || |||||||||||||| || ||||| ||
Sbjct 77067 GTCTTGCCGGTGAGAGTCTTTACAAAAATCTG 77036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268165387857656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |