Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945. 1_202015-01-15] 322 sequences; 39,089,698 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq61 273 3e-67 seq58 203 4e-46 seq30 167 3e-35 seq6 147 3e-29 seq36 141 1e-27 seq39 136 5e-26 seq7 131 2e-24 seq45 111 2e-18 seq10 102 1e-15 seq70 96.9 4e-14 seq92 91.5 2e-12 >seq61 Length=193651 Score = 273 bits (302), Expect = 3e-67 Identities = 358/494 (72%), Gaps = 19/494 (4%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||| |||||||| ||||||||||| |||||||| ||||||||||||| |||||| Sbjct 58090 GCCCTGGTCCACGTAGCGGGCCGTGTCGTTGAAGACGCGCAGCATGGGCACGATGCCGTT 58031 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||||| |||||||||||| ||||||||| || | ||||| | ||||| | | Sbjct 58030 GGACTTGCCGTTGGTGCCGGCCACGTAGCTTCCCGAAGCGCGAATGTTGTGGATGTTGAC 57971 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 || ||||||||||| ||||||||||| |||||||| | |||||| | | ||||||| Sbjct 57970 ACCAATGCCGCCGGCGTACTTGGAGATGCGCGCGCACGTCTCGAGCGTCTGGAAGATGCC 57911 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 ||| ||||||||| ||||||||| |||||| ||||| ||| | |||||| ||| || Sbjct 57910 CTCAATCGAGTCGTCCTTCATGTGCACGAGGAAGCAGCTCGACATCTGCGGGCGCGGGGT 57851 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361 ||||||||||||||||||||||| || || || |||| ||||||| || ||| Sbjct 57850 ACCGGCGTTGAAGAGCGTGGGCGTGGCGTGCGTAAAGAACTTTTGCGACATCATGTTGTA 57791 Query 1630362 GGTGGCGA--GCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATG 1630419 ||| | | ||||| | || | || ||| || | | ||||| | Sbjct 57790 GGTCTCAATGGCACG---GTCAATG--TCTTCCTTGT--GGATACCCACA---------- 57748 Query 1630420 GCGACGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGG 1630479 | ||| ||||||||||| | |||||| |||||| | | | || |||||| |||| Sbjct 57747 GAGACACGCATGAGCATCTGCTGGGGGCGCTCGGCAATCTTGTCGTTGACCTTGAGCAGG 57688 Query 1630480 TAGGACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGG 1630539 || || || | ||| ||| |||||||||| | | || ||||| |||| | Sbjct 57687 TACGAGCGCTCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCGAAGTCGCGCTCGTACTTG 57628 Query 1630540 ATGGCGGCGTCGAG 1630553 | |||||||||||| Sbjct 57627 ACGGCGGCGTCGAG 57614 Score = 226 bits (250), Expect = 3e-53 Identities = 376/539 (70%), Gaps = 12/539 (2%) Strand=Plus/Minus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040 |||||| | ||| ||||| ||||| || || ||| | || ||||| ||||| | || Sbjct 59494 CTGGTCAATGGTGAACTGAATGGCATCCGCCTTGGGGCGCGTACGCAGGTAGTAGAGACC 59435 Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCG- 1627099 |||||||||||||| ||||| ||| ||| ||| |||| || | ||| | Sbjct 59434 CGTCTTGAGGCCGCGCTTCCACGAGTAAAAGTGGCACGAAGTGA-GCTTGCCAACGTTGG 59376 Query 1627100 CGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCG 1627159 | ||||| ||| | |||||||||||| |||||| | | ||| | || ||||||| Sbjct 59375 CCTCGGCCATGTAAATGTTGAGCGACTGCGACTGGTCAATAAAGGCACCACGGTCGGCCG 59316 Query 1627160 CCATGTCGATGGTG--ACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAG 1627217 | | ||| ||| | || | | | | | ||||||||| |||||| | | |||||||| Sbjct 59315 CAAGGTCAATGAGGCAACGCTGCTTG--ATCTCCCACACCGTCTTGTAAAGTGCCTTGAG 59258 Query 1627218 GTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCCT 1627277 ||| ||| | || | | | ||||||||| ||| | | || | || Sbjct 59257 GTCATCCGGGATGACGGAG------ATGTTCTGCACCGAACCGCGATCGGCCATGATGTG 59204 Query 1627278 GTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGTT 1627337 || ||||| || |||||||| |||||||| | || ||| |||||||||||| ||| Sbjct 59203 GTTGCGAATCTCAGGCGTCCAGAGGCCGCGAGAGATGAGGTCCTTGACCAGGTGCGCGTT 59144 Query 1627338 GACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTC 1627397 || ||| | || ||||| | ||| |||||||||| ||| |||||| |||| | ||| Sbjct 59143 AACGACGTTGAACTCGCCGGCGAGAACGCGGCGCGAGTACATGTTGCTGGTAAAAGGCTC 59084 Query 1627398 GCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAG 1627457 | |||||| ||| || || |||||||| || | ||||||||||||| |||| || || Sbjct 59083 AAAGGCCTCGCAGTTTCCGAGAATCTGCGAAGTTGAGGCCGTGGGCATGGGCGCGACAAG 59024 Query 1627458 GAGCGAGTTGCGCAGGCCGTGCTGTCGAACTAGCGCGCGCAGCGCGTCCCAGTCCCAGC 1627516 ||||||||| || | ||||||||| || | ||| || | ||||||||||||| Sbjct 59023 GAGCGAGTTACGTACGCCGTGCTGCATGACATCCTGGCGAAGAGTCTCCCAGTCCCAGC 58965 Score = 152 bits (168), Expect = 6e-31 Identities = 158/206 (77%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC---ATAAAG 1628454 |||||| ||| |||||||||| |||| || | || || || |||| || || Sbjct 58290 GCCTCGTTCGGGCAAAAGAGCGTCCAGGTGCT---GTTCGCCTCGACGCGCTCCATGAAA 58234 Query 1628455 AGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGG 1628514 |||||| ||| || |||||||||||||||||||| |||||||||||||| |||||| Sbjct 58233 AGGTCAGGGACCCAGAGCGCGTAAAAGAGGTCGCGCGCGCGGTTCTCCTCCTTACCGTGG 58174 Query 1628515 TTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCA 1628574 ||||| ||| || | |||| | | |||||| ||||| ||||| ||||| |||| Sbjct 58173 TTCTTGCGGAGCTCAATAAAGTCTTCGACGTCGGCATGCCAGGGCTCAAGGTACATGGCA 58114 Query 1628575 AAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||| ||||||||||||||||||||| Sbjct 58113 AAGGAGCCCTTGCGCTTGCCGCCGCC 58088 >seq58 Length=217732 Score = 203 bits (224), Expect = 4e-46 Identities = 263/361 (73%), Gaps = 2/361 (1%) Strand=Plus/Plus Query 18130 ATCATCGACGGCGTG-CCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTT 18188 ||||||||||| ||| ||||| |||||| ||| | ||||||||| | ||||| ||| | Sbjct 32916 ATCATCGACGG-GTGCCCGCCCGGCATGCGGCTGACGGAGGCCGACGTGCAGCCGCAGCT 32974 Query 18189 GGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGT 18248 | ||||| || || || ||| || || | |||||||| ||||| ||| ||| Sbjct 32975 GACGCGGCGGCGGCCCGGACAGAGCAAGCTGACGACGCCGCGAGACGAGAAGGATGCCGT 33034 Query 18249 CATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGT 18308 | |||| || | ||||| ||| ||| ||||||||||| ||||| || ||||| || Sbjct 33035 GACCATCAAGGCCGGCACCGAGTGCGGGTTCACGCTCGGCACGCCCCTCTTCCTCTGCGT 33094 Query 18309 GGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTC 18368 | ||||| | || ||| || | ||| || || ||| |||||||||| |||||| Sbjct 33095 CGACAACCTCAACGTGCGCCCTGGCGATTACAAGGAGATGAGCAAGGTGCCCCGGCCCGG 33154 Query 18369 ACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCG 18428 ||| || ||| || ||| | ||||||||||||| || || ||||| || || Sbjct 33155 ACATGCTGACCTGACGTACCAGATCAAGTACGGCATCCGCGCCACGAGCGGCGGCGGTCG 33214 Query 18429 GTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGGCT 18488 ||| || |||||||||||| || |||||||| |||||||| |||||||| || ||||| Sbjct 33215 GTCCTCGGCCCGCGAGACCATCGGCCGCGTCGCTGCCGGCGCTGTCGCCGACAAGTGGCT 33274 Query 18489 C 18489 | Sbjct 33275 C 33275 Score = 127 bits (140), Expect = 2e-23 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103 |||||| |||||||| |||||| ||||||| || |||||| || || ||||| || Sbjct 33723 GAGGACTCGATCGGCGGAACGGTGGCGTGCGTTTGCTCCAACGTCCCTGCCGGCCTGGGT 33782 Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163 ||||| |||||||||||| |||| ||| |||||| |||| | ||||| | || || Sbjct 33783 GAGCCTTGCTTTGACAAGCTCGAAGCCATGCTCGCGCACGGTGTCATGTCGCTGCCCGCT 33842 Query 19164 ACCAAGGGATTCGAGATTGGCAGCGGGTTTGCGGG 19198 |||||||| |||||||||||| ||| |||| ||| Sbjct 33843 ACCAAGGGTTTCGAGATTGGCTCCGGATTTGAGGG 33877 >seq30 Length=443502 Score = 167 bits (184), Expect = 3e-35 Identities = 217/295 (74%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 869636 TGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACC 869695 || |||||||||||||| |||||||||||||||||| | | |||| | ||| ||| Sbjct 288673 TGAATGTTCTCGATGGCCATCTGGAAGCCGTAAAAGCAGCGCGCCTCCGGCACACTCACC 288732 Query 869696 TC-CTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754 || || || | || ||| ||||||| ||||||||||| || || || || Sbjct 288733 TCACTACAAAAGTTCTCCA-CCACGTTCTCGAGGACGATGCCGTCCGAGGAAGCAAAGAA 288791 Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACGGT 869814 ||||| |||||||||| |||||| ||||| | | | | | ||| | ||| | || | Sbjct 288792 CGCCAGCACGTGCTTGACAAAGTGCTGCTCGCCCTTGGTCATCGAGTCAAAGTCG-CGCT 288850 Query 869815 G-TCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACA 869873 | || || ||||| |||||||| || ||||||| ||||||||||||||| |||||| Sbjct 288851 GATCCTGGCCCAGGTCGACCTCCTCAGCCGTCCAGAACGAGGCCTCGGCCTTCTTGTACG 288910 Query 869874 TCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 ||||| | | ||||| |||||||||| || |||||||||| |||||||| Sbjct 288911 CGTCCCAGATATCCTGGTGCTGGATAGGGAACAGCACAAAGCGGTCCGGGTTGTC 288965 Score = 161 bits (178), Expect = 1e-33 Identities = 122/144 (85%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||||| | |||||| ||||| |||||| |||||||||||||||||| Sbjct 288388 CCCTCGTCGCGGCTGATGAGCTCGTTGGAAAAGGTGAGGCCCGGCATGAGGCCGCGCTTC 288447 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||||||||| ||||||||| ||| || || |||||||| || |||||||||||| Sbjct 288448 TTGAGCCAAAAGATCGCGCAGAAAGAGCCAGAAAAGAAGATGCCTTCCACGGCGGCAAAG 288507 Query 869300 CCGATGAGCCGCTCGGCAAAGGTG 869323 || | || ||||| ||||||||| Sbjct 288508 CCAACAAGGCGCTCAGCAAAGGTG 288531 Score = 141 bits (156), Expect = 1e-27 Identities = 221/313 (71%), Gaps = 10/313 (3%) Strand=Plus/Plus Query 868696 GGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTC 868755 |||||||||||| |||||| || ||||||||||||||||||| | |||||| | || Sbjct 288078 GGCGTACTCGCCAACGCGCTTTTCAAAAAAGTTGGTCTTGCCCTGCATCGAGATGAGGTC 288137 Query 868756 CATCCACGGGAACGGGTTGGGC--GTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGC 868813 |||||| || ||||| || | | | | || || | ||||||||| || | Sbjct 288138 CATCCAGTCAAAGGGGTTTTGCACGCCGTAAATGGCCTTAA--AGCCGAGCGACTTGACC 288195 Query 868814 AGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGC 868873 || ||||| || ||||||| ||||||||| ||||||| | |||||||||||| ||| Sbjct 288196 AGACGGTCAGCCACAAACTTGATGTACTGCTGCATGAGGGTAGAGTTCATGCCGATAAGC 288255 Query 868874 GCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATC 868933 | || || |||| ||| | ||||| ||| || ||||||||| |||||||| Sbjct 288256 TCGACGGGGAGCGCGTCGGAGATGAACTCGCACTCAATGTCGACGGCCGACTCGATGATC 288315 Query 868934 TGCCTGGGCACGTCGG---CCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCA 868990 | | ||||| || |||||||| || | |||| | | |||| ||||| ||| Sbjct 288316 T---CGCGCACGCGGGCCTCCGAGGGCGGGTGGCGGAGCTTGCGGAAGAGGAGGCAAGCA 288372 Query 868991 AAGTCGCAGTGCA 869003 ||||| ||||| Sbjct 288373 AAGTCAGTGTGCA 288385 >seq6 Length=864476 Score = 147 bits (162), Expect = 3e-29 Identities = 208/290 (72%), Gaps = 2/290 (1%) Strand=Plus/Minus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 ||||| ||||| ||||| || || |||||||| || ||| || | || |||||||| | Sbjct 332242 GAGGCGGTGCTGGAACTAAATGCATCGGACGACCGTGGCATCAATGTGGTGCGCAATAAA 332183 Query 1574028 ATCAAGCACCACGCCTCCAAGAGGATCGAC-CTGCCGCCCGGACGCCACAAGGTGATCAT 1574086 || || | || |||| | ||| ||||||| || || || | ||||| Sbjct 332182 ATTAAATCCTTTGCACAAAAGAAAGT-GACGCTGCCGCGAGGTGCTCATAAAATCATCAT 332124 Query 1574087 CCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGA 1574146 ||||| ||||||||| || | || ||||| || ||||| || ||||| |||||||| Sbjct 332123 TCTCGATGAGGCCGACAGCATGACTTCGGCAGCACAGCAAGCGCTGCGTCGTACCATGGA 332064 Query 1574147 AAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGA 1574206 | | | | |||||||| |||||||| || |||||||| || || | | ||||||| Sbjct 332063 ACTTTATGCGAGTACGACGCGATTTGCCCTCGCTTGCAACACTTCTTCCAAGATCATCGA 332004 Query 1574207 GGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGCCTGGGTGACG 1574256 | | |||| |||||||| ||||||||||||| | ||| || |||||| Sbjct 332003 GCCTATCCAGAGTCGCTGTGCCATTCTGCGCTATTCGCGTCTCAGTGACG 331954 >seq36 Length=356773 Score = 141 bits (156), Expect = 1e-27 Identities = 166/220 (75%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || ||| | | | ||||| ||||||||||||| |||||||| | || Sbjct 127273 GCTTGGCGAGCTCACCGGGAAGCACGAGGCGGACGGCGGTCTGGACCTCGCGCGAGGAGA 127332 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGC--GCC-AGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 ||| || ||||| || | ||| || ||||||||||||| ||| ||| |||| Sbjct 127333 GGGTG--GC-CTTGTCGTTGTACTTGCCGAGCTTGCCGGCCTCGGTGGCGAGGCGCTCGA 127389 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 | |||||||| || |||||||||| ||| ||||| |||||||| || ||||| Sbjct 127390 AGACGTCGTTGATGAAGGAGTTCATGATGCTCATGGACTTCTTGGAGATACCGGTGTCGG 127449 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 ||||||||||||||||||||||||| ||| | || ||||| Sbjct 127450 GGTGCACCTGCTTGAGCACCTTGTAAATGTAAGAGGAGTA 127489 >seq39 Length=335683 Score = 136 bits (150), Expect = 5e-26 Identities = 165/220 (75%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || ||| | | | ||||| ||||||||||||| |||||||| | || Sbjct 7260 GCTTGGCGAGCTCACCGGGAAGCACGAGGCGGACGGCGGTCTGGACCTCGCGCGAGGAGA 7201 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGC--GCC-AGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 | || || ||||| || | ||| || |||||||||||| ||| ||| || | Sbjct 7200 --GGGTAGC-CTTGTCATTGTACTTGCCGAGCTTACCGGCCTCGGTGGCGAGGCGCTCAA 7144 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 | |||||||| || |||||||||| ||| ||||| |||||||| || ||||| Sbjct 7143 AGACGTCGTTGATGAAGGAGTTCATGATGCTCATGGACTTCTTGGAGATACCGGTGTCGG 7084 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 ||||||||||||||||||||||||| ||| |||| ||||| Sbjct 7083 GGTGCACCTGCTTGAGCACCTTGTAAATGTACGAGGAGTA 7044 >seq7 Length=852142 Score = 131 bits (144), Expect = 2e-24 Identities = 148/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGC--G 1254426 ||||| ||||||||||||| |||||||| || | || || ||||| || | | Sbjct 810982 AGGCGGACGGCGGTCTGGACCTCGCGCGAAGAGA--GGGTAGC-CTTGTCGTTGTACTTG 811038 Query 1254427 CC-AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1254485 || || ||| ||||||||| ||| ||| |||| | ||||||| || ||||||||| Sbjct 811039 CCGAGCTTGCCAGCCTCGGTGGCGAGGCGCTCGAAGACATCGTTGATGAAGGAGTTCATG 811098 Query 1254486 ACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAG 1254545 | ||| ||||| |||||||| || ||| |||||||||||||||||||||||||| Sbjct 811099 ATGCTCATGGACTTCTTGGAGATACCGGTGTCCGGGTGCACCTGCTTGAGCACCTTGTAA 811158 Query 1254546 ATGAACGACGAGTA 1254559 ||| |||||||||| Sbjct 811159 ATGTACGACGAGTA 811172 >seq45 Length=294586 Score = 111 bits (122), Expect = 2e-18 Identities = 105/133 (79%), Gaps = 6/133 (5%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || ||||| |||||||| || |||||||||||| |||||||||| Sbjct 125609 ACTCTCTTTGAGCTCATTCTCGCTGCCAACTATCTGGACATCAAGCCTTTGCTCGATCTC 125668 Query 1592225 GGGTGC---AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAG 1592281 ||| ||| || || ||||||||| |||| | ||||||||||||||| || Sbjct 125669 ACCTGCGCAAAG---GTTGCTTCCATGATCAAAAACAAGACCCCCGAGGAGATCCGCGAG 125725 Query 1592282 ACCTTTAACATCA 1592294 ||||||||||||| Sbjct 125726 ACCTTTAACATCA 125738 >seq10 Length=783507 Score = 102 bits (112), Expect = 1e-15 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 92594 GATGCACTCGGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACAT 92653 |||| |||||| ||||| ||||| |||||| ||||| | || || ||||| Sbjct 621347 GATGGCCTCGGCAATCTGTGTGGTGAGACGCTCCTGGACCTGAAGACGCCGGGCGAACAT 621288 Query 92654 GTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCAC 92713 ||| | ||| | || ||| ||||||| ||| | || | |||| | ||| || | Sbjct 621287 TTCGGTAACGCGGGCGAGTTTGGAGAGGCCGAGGATGCGGCGCTTGGGAATGTAACCAAT 621228 Query 92714 GTGGGCCTTGCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTC 92773 |||| ||| ||| | ||||||| ||||||||||||||||||||||| | ||| | ||| Sbjct 621227 GTGGCACTTTCCCTTGAAGGGCACGAGATGGTGCTCGCACATGGAGAAGAGGTCAATGTC 621168 Query 92774 GCGCACGATCACCATCTCG 92792 ||||| ||||||||| Sbjct 621167 CTTGACGATGACCATCTCG 621149 >seq70 Length=172613 Score = 96.9 bits (106), Expect = 4e-14 Identities = 161/232 (69%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 1178270 CACCGCGACCTCAAGTCGTCCAACCTGCTCGTCGACGACAACTTCACAATCAAGGTGGCC 1178329 || |||||||||||| | ||| ||||||| || | |||| | ||||||||| Sbjct 143091 CAGCGCGACCTCAAGGCCCGAAACGTGCTCGTGGATATCCACTTTAATGCCAAGGTGGCA 143150 Query 1178330 GACTTTGGCTTTGCCCGCATCCG---CGAGGACAATGCGACGATGACGCGGTGCGGCACG 1178386 |||||||| || | ||| | ||||||| | || |||||| || || ||| Sbjct 143151 GACTTTGGTCTTTCGCGCTTGAAGACCGAGGACGACGCTGGCATGACGGCCTGTGGTACG 143210 Query 1178387 CCGGCGTGGACGGCGCCCGAGGTCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGACGTC 1178446 ||||| ||||| ||||| ||| | | ||||| ||| ||||||| |||||| Sbjct 143211 CCGGCATGGACTGCGCCGGAGATTGTCAAACTCGAGCAGTACGACGAAAAGGTGGACGTC 143270 Query 1178447 TACTCGTTTGGCGTCGTCATGTGGGAGATCATCACGCGCAAGCAGCCCTACA 1178498 || ||||||||| | |||||||||||| | | | ||| || |||| |||| Sbjct 143271 TATTCGTTTGGCATTGTCATGTGGGAGCTTTTTGCTCGCGAGGAGCCGTACA 143322 Score = 89.7 bits (98), Expect = 6e-12 Identities = 147/210 (70%), Gaps = 9/210 (4%) Strand=Plus/Plus Query 1349479 CACCGCGACCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCC 1349538 || |||||||||||| | | ||| |||| || || ||| || | ||||||||| Sbjct 143091 CAGCGCGACCTCAAGGCCCGAAACGTGCTCGTGGATATCCACTTTAATGCCAAGGTGGCA 143150 Query 1349539 GACTTTGGCCTGGCGCGCATTAAG---GAGGACAACGCCACGATGACCCGCTGCGGCACG 1349595 |||||||| || ||||| | ||| |||||| |||| ||||| ||| || ||| Sbjct 143151 GACTTTGGTCTTTCGCGCTTGAAGACCGAGGACGACGCTGGCATGACGGCCTGTGGTACG 143210 Query 1349596 CCCTGCTGGACGGCGCCCGAG---GTCATACGCGGCGAGCGCTACGACGAGCGGGCCGAC 1349652 || ||||| ||||| ||| |||| || ||||| |||||||| || ||| Sbjct 143211 CCGGCATGGACTGCGCCGGAGATTGTCAAAC---TCGAGCAGTACGACGAAAAGGTGGAC 143267 Query 1349653 GTCTACTCATTTGGCATCATCGCGTGGGAG 1349682 ||||| || |||||||| || ||||||| Sbjct 143268 GTCTATTCGTTTGGCATTGTCATGTGGGAG 143297 >seq92 Length=98443 Score = 91.5 bits (100), Expect = 2e-12 Identities = 121/166 (73%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 1572472 CTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTCGGCGTCGGTGTGGTTGAAGAGCAC 1572531 ||| |||||||| | || ||| ||| || |||| | | | ||||| ||||| || Sbjct 83327 CTGTGCGATGCGGTCGCCGACCTTGACCTCGAGGTCCTCCTGAGCATGGTTAAAGAGGAC 83268 Query 1572532 GACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGACGTCGA--TGCCC 1572589 ||||| || | |||||| || ||| |||||| ||||| ||||| ||||||| ||| Sbjct 83267 AACGCCAACGTTGCCGCGGTAATCGCGATCGATCACGCCGGCGCCCACGTCGACGTGCTT 83208 Query 1572590 CTGACG-GCCAGGGACGAGCGCGGCGCCACGCGCCCATAGTAGCCC 1572634 || | || || ||||||||||||||||||||| ||| |||| Sbjct 83207 CTTCCACGCGAGCCCCGAGCGCGGCGCCACGCGCCCGTAGGTGCCC 83162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107112775172074