Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945.
1_202015-01-15] 322 sequences; 39,089,698 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq7 113 9e-20
>seq7
Length=852142
Score = 113 bits (124), Expect = 9e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| |||||||| || ||||| || || || || || | | |||
Sbjct 77247 CGGAGCACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTAAGCGTGCGGCCG 77188
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||| ||||| || | || ||||| || || || || ||||||
Sbjct 77187 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGATACCCTCCTTA 77128
Query 82716 TCTTGAATCTT-TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| |||||||| ||||| || || ||||| || || ||| || || || | || ||
Sbjct 77127 TCCTGAATCTTCTGCTTG-ACGTTCTCAATGGTGTCCGAAGGCTCGACATCAAGGGTGAT 77069
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||||||||| ||||||||
Sbjct 77068 GGTCTTGCCGGTGAGAGTCTTTACAAAAATCTGCAT 77033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981823149349158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |