Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945. 1_202015-01-15] 322 sequences; 39,089,698 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 5e-11 >seq7 Length=852142 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || || || || ||| | || || || || ||| Sbjct 77264 CAGATCTTTGTCAAGACTCTGACTGGCAAGACTATTACTCTCGATGTCGAGCCCTCGGAC 77323 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||||| |||||||| || || || || ||| || || || Sbjct 77324 ACCATTGAGAACGTCAAGCAGAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAGCAG 77383 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| | || || || | || | ||| |||||| || Sbjct 77384 CGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTTAGCGACTACAACATC 77443 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||||||||| |||||||| Sbjct 77444 CAGAAGGAGTCTACTCTCCACCTTGT 77469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815924250562