Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945. 1_202015-01-15] 322 sequences; 39,089,698 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq61 324 2e-83 seq7 161 1e-34 seq53 132 5e-26 seq49 132 5e-26 seq1 127 2e-24 seq30 102 9e-17 >seq61 Length=193651 Score = 324 bits (358), Expect = 2e-83 Identities = 1154/1781 (65%), Gaps = 67/1781 (4%) Strand=Plus/Minus Query 80013 CTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTT 80072 |||||| | | ||||| | ||||| ||||| ||||| | |||||||||||||| Sbjct 59479 CTGAATGGCATCCGCCTTGGGGCGCGTACGCAGGTAGTAGAGACCCGTCTTGAGGCCGCG 59420 Query 80073 CTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGAT 80132 |||||| ||| | ||| ||| ||||||| ||| ||| | ||||| | || Sbjct 59419 CTTCCACGAGTAAAAGTGGCACGAAGTGAGCTTGCCAACGTTGGCCTCGGCCATGTAAAT 59360 Query 80133 GTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGA 80192 ||| || ||||| ||||| || || || ||||| || ||||| | ||||| | | Sbjct 59359 GTTGAGCGACTGCGACTGGTCAATAAAGGCACCACGGTCGGCCGCAAGGTCAATGAGGCA 59300 Query 80193 CTTTTGTGGAATTTCCCATACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTC 80249 || || ||||| || || || | |||| || || || || ||| | Sbjct 59299 ACGCTGCTTGATCTCCCACACCGTCTTGTAAAGTGCCTTG---AGGTCATCCGGGATGAC 59243 Query 80250 C-AGATTTT--GCAC---ACTGCCACCGTCCTTTACAATTTGATTTTTCAATTCAGACGT 80303 |||| || |||| || || | || || | | | || || | |||| ||| Sbjct 59242 GGAGATGTTCTGCACCGAACCGCGATCGGCCATGA---TGTGGTTGCGAATCTCAGGCGT 59186 Query 80304 CCAGACACCAAGCTTGTGCAGATCTTTCACAAGGTGCTTGTTAATCATGACAAACTCTCC 80363 ||||| || | | || || || || |||||| ||||| | | ||||| || Sbjct 59185 CCAGAGGCCGCGAGAGATGAGGTCCTTGACCAGGTGCGCGTTAACGACGTTGAACTCGCC 59126 Query 80364 CGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCC 80423 ||||| ||| ||| |||| ||| | || |||||||||| |||||| |||||| Sbjct 59125 GGCGAGAACGCGGCGCGAGTACATGTTGCTGGTAAAAGGCTCAAAGGCCTCGCAGTTTCC 59066 Query 80424 GAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCC 80483 ||| ||||| | || ||||| ||||| || |||| | || || || || | ||| Sbjct 59065 GAGAATCTGCGAAGTTGAGGCCGTGGGCATGGGCGCGACAAGGAGCGAGTTACGTACGCC 59006 Query 80484 GTGCTTCTTGATATCCTCGCGCAAA-TCTGACCAAAAATCAACCCCAACGCTGTGACC-- 80540 ||||| | ||| ||||| ||| | | ||| | | | | || | | | | | | Sbjct 59005 GTGCTGCATGACATCCTGGCGAAGAGTCTCCC---AGTCCCAGCCGAGCTCCGGGTTCGG 58949 Query 80541 ---------CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGT 80591 ||| | || ||| || ||||||| | || || |||| || | Sbjct 58948 CTTCTCGTTCCAGAGATCAAACTGGAACTTGCCCTCGCTCATGGGCGAGCCCGGAAAGGA 58889 Query 80592 CTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAAT 80651 |||||| |||||||| |||||||||||| ||||| | | ||| | ||||| Sbjct 58888 CTCGTAATGGCCCTCCTCCTTGGCCAGCTCGCACGAGGCGGTGCAGGCGCCAAAGTAAAT 58829 Query 80652 GCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCAT 80711 | ||| |||| | | ||||| |||||||| ||| || |||| ||| | Sbjct 58828 GGTCTCGAAGATGTCACGGTTCAATTTGCGCGCCTCCGGGCTCTCAAACGGGTAGCGAAG 58769 Query 80712 CATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT 80771 | ||||| ||| || |||||||| || || ||| ||| |||||||||||| |||| Sbjct 58768 CTCCATGAGAGCGTTGGCGAGGCCCTGTACACCAATGCCGACAGGGCGGTGGCGCATGTT 58709 Query 80772 CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCG 80831 |||||||||||| | ||||||||||| || || |||||||| ||||| Sbjct 58708 GCTGCGCTCGGCCTCCTCGACGGGGTAAAAGTTGCCGTCAATAACGCGGTTTAGGTTCTT 58649 Query 80832 TGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCC-CTTC---- 80886 || ||||| || ||||||| || ||||||||| || ||| ||| |||| Sbjct 58648 GGTCACAACTTTGGTGACATCATAGAGGCCCTGAAAGTC--ATAGGTGCCCTCTTCGATG 58591 Query 80887 ---ACAAA--TGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941 ||||| ||| ||||| | | || ||||| ||||| || || ||||| || | Sbjct 58590 TTGACAAACTTGC--GAAGGTTGATCGAGGCCAGGTTGCAAACAGCGACCTCATCCGGGG 58533 Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001 | || |||||| ||| |||||||| | || || ||||| || | || ||||| |||| Sbjct 58532 CAGTGTACTCGATGATCTCCGTGCAGAGGTTCGAGGACTTGATGATGCCAAGGTTCTTCT 58473 Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061 |||| |||||| |||||| ||||||||| | ||| | || ||| ||||||| || Sbjct 58472 GGTTCGACTTGCGGTTGCATGCGTCCTTGAAAAGCATAAAGGGCACACCCGTCTCGATCT 58413 Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTC----GCGCGCCTTGACCACCTTGCGGAATTTG 81117 | | |||| || || ||| | || |||||| | | |||||| Sbjct 58412 GGCAGCTGAGAATCTGGTACCAGAGGTCCTGGGCGCGC----ATCGTCTTGCGACCGCGA 58357 Query 81118 CCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAG 81176 || || | | || |||| ||| || | ||||| | | || | | || | ||| Sbjct 58356 CCCTCCTTCTCGTAGCGCTCGTAGAGC-TCCTTGAACTCGTCGCCATAGACGTCCGAGAG 58298 Query 81177 -GTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCA 81235 || ||| |||||| ||||| | || |||| | ||| ||| || || || Sbjct 58297 CCCCTTGGC-CTCGTTCGGGCAAAAGAGCGTCCAGGTGCTGTTCGCCTCGACGCGCTCCA 58239 Query 81236 TGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCAC 81295 ||||| |||||||| |||||| ||| || |||||||| ||| |||||| | || Sbjct 58238 TGAAAAGGTCAGGGACCCAGAGCGCGTAAAAGAGGTCGCGCGCGCGGTTCTCCTCCTTAC 58179 Query 81296 CCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACA 81355 | ||||| ||| | ||| | |||||| || ||| |||||||| ||||| || |||| Sbjct 58178 CGTGGTTCTTGCGGAGCTCAATAAAGTCTTCGACGTCGGCATGCCAGGGCTCAAGGTACA 58119 Query 81356 CGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAA 81412 ||| | || |||||||| | ||| ||||||| ||||| ||||| || |||| | Sbjct 58118 TGGCAAAGGAGCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTAGCGGGCCGTGTCGTTGA 58059 Query 81413 ATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTAC---CCACGATACGCG 81469 | || |||| ||| || | ||| || | |||| ||||| || | ||||| || || Sbjct 58058 AGACGCGCAGCATGGGCACGATGCCGTTGGACTTGCCGTTGGTGCCGGCCACG-TA-GC- 58002 Query 81470 ACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCT 81529 ||| ||||| | ||| ||| | ||| ||||| || | |||| || || Sbjct 58001 TTCCCGAAGCGCGAATGTTGTGGATGTTGACACCAATGCCGCCGGCGTACTTGGAGATGC 57942 Query 81530 GAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCA 81589 | || ||| | | |||| | || ||||| || || | ||||||| | | Sbjct 57941 GCGCGCACGTCTCGAGCGTCTGGAAGATGCCCTCAATCGAGTCGTCCTTCATGTGCACGA 57882 Query 81590 AGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGT 81649 ||| ||||| |||||||| |||| | ||||| ||||| || || || || |||| Sbjct 57881 GGAAGCAGCTCGACATCTGCGGGCGCGGGGTACCGGCGTTGAAGAGCGTGGGCGTGGCGT 57822 Query 81650 GAATGAAATAACGGTT-TGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCA 81708 | | ||| ||| || ||||||| || ||||| || || | || ||| || || Sbjct 57821 GCGT-AAAGAACTTTTGCGACATCATGTTGTAGGTCTCAATGGCACGGTCAATGTCTTCC 57763 Query 81709 CCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 ||| ||||| | || |||||||| | ||| | |||||| Sbjct 57762 TTGTGGATACCCACAGAGACACGCATGAGCATCTGCTGGGG 57722 >seq7 Length=852142 Score = 161 bits (178), Expect = 1e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || ||||||||||||||||| || || ||| | Sbjct 77261 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACTATTACTCTCGATGTCGAGCCCTCG 77320 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| || ||||||||||||||||| ||||| || || ||| Sbjct 77321 GACACCATTGAGAACGTCAAGCAGAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAG 77380 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAA 27584 |||||||| || || ||||| ||||| |||||||| | || || | |||| ||||| || Sbjct 77381 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTTAGC-GACTACAA 77439 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||||| || || || | || || || ||||| Sbjct 77440 CATCCAGAAGGAGTCTACTCTCCACCTTGTGCTCCGCCTCCGTGGTGG 77487 Score = 161 bits (178), Expect = 1e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || ||||||||||||||||| || || ||| | Sbjct 77717 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACTATTACTCTCGATGTCGAGCCCTCG 77776 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| || || |||||||||||||| ||||| || || ||| Sbjct 77777 GACACGATTGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCTGATCAG 77836 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAA 27584 |||||||| ||||| ||||| ||||| |||||||||| || || | |||| ||||| || Sbjct 77837 CAGCGTCTCATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACACTTAGC-GACTACAA 77895 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | || ||||| ||||| Sbjct 77896 CATCCAGAAGGAGTCTACGCTCCACCTGGTGCTCCGCCTTCGTGGTGG 77943 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || ||||||||||| || || ||||| || ||| | Sbjct 77033 ATGCAGATTTTTGTAAAGACTCTCACCGGCAAGACCATCACCCTTGATGTCGAGCCTTCG 77092 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| || |||||||| |||||||| || || || || ||| Sbjct 77093 GACACCATTGAGAACGTCAAGCAGAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAG 77152 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAA 27584 |||||||| || || ||||| ||||| |||||||| | || || | |||| ||||| || Sbjct 77153 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTTAGC-GACTACAA 77211 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||||| || || || | || ||||| ||||| Sbjct 77212 CATCCAGAAGGAGTCTACTCTCCACCTCGTGCTCCGCCTTCGTGGTGG 77259 Score = 134 bits (148), Expect = 2e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || ||||| || ||| | Sbjct 77489 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGATGTCGAGCCTTCG 77548 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| || || ||||| |||||||| ||||| || || ||| Sbjct 77549 GACACCATTGAGAACGTCAAGCAGAAGATCCAGGATAAGGAGGGTATTCCCCCTGATCAG 77608 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || || || ||||| |||||||| | || || || ||| ||||| || Sbjct 77609 CAGCGTCTCATCTTCGCAGGCAAGCAGCTCGAGGACGGCCGCACGCTCAGC-GACTACAA 77667 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || | || || || ||||| Sbjct 77668 CATCCAGAAGGAGTCCACCCTCCACCTTGTGCTCCGCCTCCGTGGTGG 77715 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || ||||| || || || ||||| || ||| | Sbjct 76805 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAAACCATCACCCTTGATGTCGAGCCTTCG 76864 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| || || ||||| |||||||| ||||| || || ||| Sbjct 76865 GACACTATTGAGAACGTCAAGCAGAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCAG 76924 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAA 27584 |||||||| || || ||||| ||||| |||||||| | || || | |||| ||||| || Sbjct 76925 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTTAGC-GACTACAA 76983 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||||| || || || | || ||||| ||||| Sbjct 76984 CATCCAGAAGGAGTCTACTCTCCACCTCGTGCTCCGCCTTCGTGGTGG 77031 >seq53 Length=241909 Score = 132 bits (146), Expect = 5e-26 Identities = 166/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 27409 CAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGAT 27468 || |||||||| ||||| || || || ||||| || || || || || ||| | || Sbjct 193220 CAGATCTTTGTAAAGACCCTCACGGGTAAGACCATCACCCTCGATGTCGAGCCCTCGGAC 193279 Query 27469 AGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAG 27528 | ||| | || ||||| || ||||||||||||||||| ||||| || || |||||| Sbjct 193280 ACCATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGTATTCCCCCTGATCAGCAG 193339 Query 27529 CGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGT 27587 || || || || || || ||||| |||||||| | || || || ||| ||||| || | Sbjct 193340 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCAGC-GACTACAACAT 193398 Query 27588 CCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||||| ||||| || || || ||| | || ||||| ||||| Sbjct 193399 CCAGAAGGAGTCCACCCTCCACCTGGTCCTTCGCCTTCGTGGTGG 193443 >seq49 Length=285000 Score = 132 bits (146), Expect = 5e-26 Identities = 166/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 27409 CAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGAT 27468 || ||||| |||||||| ||||| |||||||| || || || || || ||| | || Sbjct 148119 CAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGATGTCGAGCCCTCGGAC 148178 Query 27469 AGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAG 27528 | ||| | || ||||| || || |||||||||||||| || || || || |||||| Sbjct 148179 ACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCCGATCAGCAG 148238 Query 27529 CGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGT 27587 ||||| || || || || ||||| |||||||| | || || || ||| ||||| || | Sbjct 148239 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCAGC-GACTACAACAT 148297 Query 27588 CCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||||| || || || || || || | || ||||||||||| Sbjct 148298 CCAGAAGGAGTCTACCCTCCACCTCGTGCTCCGCCTTCGCGGTGG 148342 >seq1 Length=1674554 Score = 127 bits (140), Expect = 2e-24 Identities = 289/435 (66%), Gaps = 0/435 (0%) Strand=Plus/Plus Query 31968 CATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCT 32027 |||||| | ||| || ||||||||||| || || |||||||| | ||| | ||| | Sbjct 1192595 CATTCCCAGCATGGTCGATGGCCTCAAGCCCTCGCAACGCAAGGTACTTTACTCGTGCTT 1192654 Query 32028 CAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCA 32087 ||| || ||| |||||| ||||| || ||||| ||||||||| | || || Sbjct 1192655 TAAGCGCAAGCTGCGCTCTGACATCAAGGTCGCCCAGCTTGTTGGCTACGTGTCGGAACA 1192714 Query 32088 AACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAA 32147 |||| || |||||||| || | ||||| | || | |||| | | || || | Sbjct 1192715 CTCGGCGTACCACCACGGTGAAGTTTCGCTTTCGTCGACGGTCGTCAGCATGGCGCAAAC 1192774 Query 32148 CTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCT 32207 |||||| || | || ||| | ||| | ||| || || || ||||| | || | Sbjct 1192775 CTTTGTTGGCTCCAACAACATCAACCTGCTCTTCCCCAGCGGCCAATTTGGCTCGCGCAT 1192834 Query 32208 CGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGAC 32267 ||| || |||||||||||| |||||||||| ||||| |||||||| ||| || Sbjct 1192835 TCTCGGCGGAAAGGATGCTGCGTCTGCCCGTTACATTTTCACGCGTCTCGCGCCTCTCAC 1192894 Query 32268 GCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCA 32327 ||||||| | ||| | | ||||||||| | ||| | ||| || || ||||| Sbjct 1192895 GCGCAAGCTCTTCCATGAGCACGACGATGCGCTCCTCGACTACCTCGAGGACGATGGTCA 1192954 Query 32328 GCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGA 32387 | ||||||| || ||| ||||| | || ||| || | | || ||| | | Sbjct 1192955 GTCTATCGAGCCCAAGTACTATGCGCCGGTCGTGCCCATGGTCCTCATCAATGGTTCGCA 1193014 Query 32388 AGGCATCGGAACGGG 32402 ||| || || ||||| Sbjct 1193015 AGGTATTGGCACGGG 1193029 Score = 100 bits (110), Expect = 3e-16 Identities = 191/278 (69%), Gaps = 5/278 (2%) Strand=Plus/Plus Query 31983 GGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGC-CTCAAGAAGAACCT-- 32039 ||| |||||||| || || ||||||||||| | | || |||| || ||| || || Sbjct 1396940 GGATGGCCTCAAACCGTCGCAGCGCAAGGTCCTTTTCG-CTGCGCTGAAGCGAAATCTCA 1396998 Query 32040 -GTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATC 32098 || || | || || |||||||| | |||||||| | ||||| || || |||| Sbjct 1396999 CATCTTCAGAGCTCAAAGTCGCGCAGCTTGCCGGCTACGTCGGCGAGCAGACCGCTTATC 1397058 Query 32099 ACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTG 32158 | ||||||||| ||| | | | || || ||||| | || ||| |||||||||| Sbjct 1397059 ATCACGGCGAGCAGTCATTGTATGCGACGATCATCAACATGGCCCAGGACTTTGTCGGAA 1397118 Query 32159 CAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCA 32218 || || ||| | || || ||||| || ||||| ||||| || || |||| Sbjct 1397119 GTAACAATCTGCCGCTTCTGTTCCCCTCTGGTCAATTTGGCACCCGTCTGCAGGGCGGCA 1397178 Query 32219 AGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTC 32256 | || ||||| ||| | ||||| || ||||| |||||| Sbjct 1397179 AAGACGCTGCAAGCCCGCGTTATATATTCACGCGTCTC 1397216 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 31204 ATTCCGAAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCACGAGTGCACGCTT 31263 || || |||||||| || ||||||||||| || || ||| |||| || || Sbjct 1396080 ATCCCCAAGCTCGAGGATGCCAACTGGGCGGGGACGGCGCGCTCGAGCGAGGCGACCCTC 1396139 Query 31264 ATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGG 31323 ||| | || || |||||||| || ||||| ||||| |||| || ||| || ||||| Sbjct 1396140 ATTCTCACTGAAGGTGACTCCGCCAAGGCACTTGCCGTTGCAGGTTTGCCCGTCGTGGGT 1396199 Query 31324 CGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGC 31379 ||| | | | ||| ||||| ||||| || ||||| |||| ||||| || ||||| Sbjct 1396200 CGCGACGGCTACGGCGTGTTCCCGCTTCGCGGCAAACCGCTCAACGTGCGCGACGC 1396255 Score = 87.8 bits (96), Expect = 2e-12 Identities = 219/330 (66%), Gaps = 2/330 (1%) Strand=Plus/Plus Query 31210 AAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCACGAGTGCACGCTTATTATT 31269 ||||| |||||||||||| ||||| | ||| ||| | ||||||| || ||| | Sbjct 1191798 AAGCTTGACGACGCCAACAATGCCGGCGGTCGCAACTCGGAAAAGTGCACCCTCATTCTC 1191857 Query 31270 ACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGCGCAAT 31329 ||||| |||||||| || ||| | | || ||| || | ||||| || || || | Sbjct 1191858 ACCGAAGGTGACTCCGCCAAGACCTTGGCCATTAGCGGACTCAGTGTCGTCGGTCGTGAC 1191917 Query 31330 GCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGTTAAA 31389 | ||| || |||||||| ||||| || | | ||||| || || ||||| | Sbjct 1191918 AACTACGGCGTCTTTCCGCTACGAGGAAAACTCCTCAACGTCCGCGAGGCCTCGCACAGT 1191977 Query 31390 CAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCATGGC 31449 ||| | | | | || ||||| | ||| | | |||||| | || || |||| ||| Sbjct 1191978 CAGATCATGAAGAACGAAGAAATCCAAAACATCATGAAGATCATGGGACTGCAGCCCGGC 1192037 Query 31450 AAGGTATATAAT-TCACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCGACGC 31508 ||| |||| | ||| | || | |||||||| | |||||||| ||||| || Sbjct 1192038 AAGAACTATACTGACAC-CAAAGGTCTCCGGTACGGCCATCTCATGATCATGACGGATCA 1192096 Query 31509 AGATCTCGACGGCAGTCACATCAAGGGTCT 31538 |||| || || ||||||||||| || Sbjct 1192097 GGATCATGATGGTTCGCACATCAAGGGACT 1192126 >seq30 Length=443502 Score = 102 bits (112), Expect = 9e-17 Identities = 299/453 (66%), Gaps = 12/453 (3%) Strand=Plus/Minus Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767 |||| | |||| || | | |||||| |||||||| || ||||||||||| || ||| Sbjct 288527 TTTGCTGAGCGCCTTGTTGGCTTTGCCGCCGTGGAAGGCATCTTCTTTTCTGGCTCTTTC 288468 Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827 || | || || ||||| || ||||| ||||| ||||| || || | ||||| |||||| Sbjct 288467 TGCGCGATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCGGGCCTCACCTTTTCCAACGAG 288408 Query 64828 CTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTAC--CCTGTTCAGCCACC 64885 || ||| || |||||||| | ||| || ||||| || | ||| ||| || | | Sbjct 288407 CTCATCAGCCGCGACGAGGGCATGCACACTGACTTTGC--TTGCCTCCTCTTCCGCAAGC 288350 Query 64886 TCAAGGACAAACCATCACATGGGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTG 64945 || || || || | | | || || | | ||||| || || |||| Sbjct 288349 TCCGCCACCCGCCCTCGGAGGCCCGCGTGCGCGAGATCATCGAGTCGGCCGTCGACATTG 288290 Query 64946 AAAAGGAATTCATTACTGCCGCGCTTCCGTGTCG-TCTCATCGGCATGGATGCCGATAAG 65004 | || ||||| | | ||||| ||| |||| || ||||||||| | | Sbjct 288289 AGTGCGAGTTCATCTCCGACGCGC-TCCCCGTCGAGCTTATCGGCATGAACTCTACCCTC 288231 Query 65005 ATGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCC 65064 ||| | ||||| ||| | ||||| || || || ||| | | | | || ||||| || Sbjct 288230 ATGCAGCAGTACATCAAGTTTGTGGCTGACCGTCTGGTCAAGTCGCTCGGCTTTAAGGCC 288171 Query 65065 ---TACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAG 65121 ||| || | | ||| || |||||||||||||| ||| || |||| ||| Sbjct 288170 ATTTAC-GGCGTGC--AAAACCCCTTTGACTGGATGGACCTCATCTCGATGCAGGGCAAG 288114 Query 65122 ACTAACTTTTTTGAAAAGAGGGTAGGTGATTAC 65154 || ||||||||||||||| | || || || ||| Sbjct 288113 ACCAACTTTTTTGAAAAGCGCGTTGGCGAGTAC 288081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308104500640