Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945.
1_202015-01-15] 322 sequences; 39,089,698 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq30 95.1 1e-14
>seq30
Length=443502
Score = 95.1 bits (104), Expect = 1e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607
|| ||||| ||| |||| || ||||| | ||| || || ||||| ||||| || |
Sbjct 288367 CAAGCAAAGTCAGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCGTTGGAAAAGGTGAGG 288426
Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667
|| ||||| | || | ||| || |||||||| || ||| || || |||||||||||
Sbjct 288427 CCCGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATCGCGCAGAAAGAGCCAGAAAAGAAG 288486
Query 4668 ATGCCTTCTACGGCGGCAAA 4687
|||||||| |||||||||||
Sbjct 288487 ATGCCTTCCACGGCGGCAAA 288506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427047924097226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |