Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945.
1_202015-01-15] 322 sequences; 39,089,698 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq30 96.9 5e-15
>seq30
Length=443502
Score = 96.9 bits (106), Expect = 5e-15
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
||||| ||||| ||||| || ||||| || || || || ||||||||||| || || |
Sbjct 288409 TCGTTGGAAAAGGTGAGGCCCGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATCGCGCAG 288468
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAA 48280
||||| ||||||||||| |||||||| ||||| |||||
Sbjct 288469 AAAGAGCCAGAAAAGAAGATGCCTTCCACGGCGGCAAA 288506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694666003958080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |