Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945.
1_202015-01-15] 322 sequences; 39,089,698 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq30 100 4e-16
>seq30
Length=443502
Score = 100 bits (110), Expect = 4e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689
|| ||||| ||| || | ||| || || | || || | ||||| ||||| |||||
Sbjct 288367 CAAGCAAAGTCAGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCGTTGGAAAAGGTGAGG 288426
Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749
|| ||||| || || ||||| ||||||||||| || || |||||| |||||||||||
Sbjct 288427 CCCGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATCGCGCAGAAAGAGCCAGAAAAGAAG 288486
Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTC 46784
|||||||| || || || || | ||||| | |||
Sbjct 288487 ATGCCTTCCACGGCGGCAAAGCCAACAAGGCGCTC 288521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712931530439040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |