Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq5719 123 2e-23 >seq5719 Length=28269 Score = 123 bits (136), Expect = 2e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 |||||| ||||| || ||||| ||| | |||||||| ||||| || | ||| ||||| Sbjct 20014 AATGGCGTTGCCACCTTGTCACATGTTTTGCCAATTCTACGTGGCGGACGGTGAGTTGTC 20073 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 |||||||||||||| || ||||| || ||||| || || ||||| || |||||||| || Sbjct 20074 ATGTCAAATGTATCAGCGTTCCGCCGACATGGGGCTTGGAGTTCCCTTTAATATTGCCAG 20133 Query 20520 TTATGCGCTGCTTACG 20535 || |||||||||||| Sbjct 20134 CTACGCGCTGCTTACG 20149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399053684636770