Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq18532 86.0 5e-12 >seq18532 Length=6745 Score = 86.0 bits (94), Expect = 5e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 || ||||||||||||||| || ||||| || ||||| || || || | ||||| || | Sbjct 5345 CAGCATGCAGATATTTGTGAAGACCTTGACGGGCAAGACCATCACGTTGGATGTGGAGCC 5286 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 | ||||| | || | |||||||| |||||| | || ||||| | || ||| Sbjct 5285 GTCCGACACGATTGACAATGTTAAGGCCAAAATTCAGGACAAGGAAGGAATCCCACCTGA 5226 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGAT 24987 |||||| ||| |||| | ||| ||||| || || || ||| Sbjct 5225 CCAGCAGCGTCTAATCTTTGCTGGCAAGCAGCTCGAGGAT 5186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418167442829120