Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq23504 91.5 1e-13 >seq23504 Length=13209 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 |||||| || | ||| || || ||||||||||| || ||||| || || || || || Sbjct 5748 GTTGAAAAGGATCACACCGACATTGCCGCGGTAATCAGCGTCAATGACACCAGCACCAGT 5689 Query 5704 GTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCATC 5763 ||||||||| | ||| | || || ||||| ||||| || |||||| | ||||| ||||| Sbjct 5688 GTCGATGAATTTCTTCAATGCAAGACCGGAACGGGGGGCAACGCGGGCATAGCAGCCATC 5629 Query 5764 GGG 5766 ||| Sbjct 5628 GGG 5626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429914006859632