Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq21701 122 6e-23 seq20524 122 6e-23 seq20136 122 6e-23 seq19620 122 6e-23 seq19655 118 7e-22 seq3975 118 7e-22 seq2442 118 7e-22 seq1768 118 7e-22 seq19621 109 4e-19 seq18804 109 4e-19 seq5070 109 4e-19 seq1166 109 4e-19 seq22690 95.1 8e-15 seq20387 95.1 8e-15 seq20386 95.1 8e-15 seq8903 95.1 8e-15 seq287 95.1 8e-15 seq12834 93.3 3e-14 seq233 89.7 3e-13 seq18713 82.4 5e-11 >seq21701 Length=19260 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| ||||||||| ||||||||||| || |||||| | Sbjct 16396 AAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 16455 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| ||||||||||| Sbjct 16456 TAATCCATTCATGCGCGTCACTAGTTAGATGACGA 16490 >seq20524 Length=18870 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| ||||||||| ||||||||||| || |||||| | Sbjct 7143 AAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 7202 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| ||||||||||| Sbjct 7203 TAATCCATTCATGCGCGTCACTAGTTAGATGACGA 7237 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 9411 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTATGCTATCGGTCTCGC 9470 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||| ||| Sbjct 9471 ACCAATATTTAGCTTTA 9487 >seq20136 Length=7186 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| ||||||||| ||||||||||| || |||||| | Sbjct 5105 AAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 5046 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| ||||||||||| Sbjct 5045 TAATCCATTCATGCGCGTCACTAGTTAGATGACGA 5011 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 1900 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTATGCTATCGGTCTCGC 1841 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||| ||| Sbjct 1840 ACCAATATTTAGCTTTA 1824 >seq19620 Length=23786 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| ||||||||| ||||||||||| || |||||| | Sbjct 18002 AAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 18061 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| ||||||||||| Sbjct 18062 TAATCCATTCATGCGCGTCACTAGTTAGATGACGA 18096 >seq19655 Length=10972 Score = 118 bits (130), Expect = 7e-22 Identities = 82/93 (88%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| ||||||||| ||||||||||| || |||||| | Sbjct 937 AAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 878 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 |||||| |||||||||||||||| ||||||||| Sbjct 877 TAATCCATTCATGCGCGTCACTAGTTAGATGAC 845 >seq3975 Length=52886 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| ||||||||| |||| |||||| || |||||| | Sbjct 15061 AAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTACATAGGGACACTGGGAATCTCAT 15120 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| ||||||||||| Sbjct 15121 TAATCCATTCATGCGCGTCACTAGTTAGATGACGA 15155 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 17876 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTATGCTATCGGTCTCGC 17935 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||| ||| Sbjct 17936 ACAAATATTTAGCTTTA 17952 >seq2442 Length=3360 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| ||||| ||||||||| ||||||||||| || |||||| | Sbjct 3172 AAGCCCGTTCCCTTGGATGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 3231 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| ||||||||||| Sbjct 3232 TAATCCATTCATGCGCGTCACTAGTTAGATGACGA 3266 >seq1768 Length=6572 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| |||||||||||||||||| ||||||||| ||||||||||| || |||||| | Sbjct 6384 AAGACCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 6443 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| ||||||||||| Sbjct 6444 TAATCCATTCATGCGCGTCACTAGTTAGATGACGA 6478 >seq19621 Length=8862 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||| |||| |||| ||||||||||| || |||||| | Sbjct 5658 AAGCCCGTTCCCTTGGCAGTGGGTTCGATAGACAGTAGATAGGGACAGTGGGAATCTCAT 5717 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| | |||||||||||||||| ||||||||||| Sbjct 5718 TAATACATTCATGCGCGTCACTAGTTAGATGACGA 5752 >seq18804 Length=21373 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||| |||| |||| ||||||||||| || |||||| | Sbjct 15714 AAGCCCGTTCCCTTGGCAGTGGGTTCGATAGACAGTAGATAGGGACAGTGGGAATCTCAT 15773 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| | |||||||||||||||| ||||||||||| Sbjct 15774 TAATACATTCATGCGCGTCACTAGTTAGATGACGA 15808 >seq5070 Length=34730 Score = 109 bits (120), Expect = 4e-19 Identities = 80/93 (86%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||||||||||||| ||||||||| ||||||||||| || |||||| ||| Sbjct 17269 GCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCATTA 17210 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||||||| ||||||| ||||||||||| Sbjct 17209 ATCCATTCATGCACGTCACTTGTTAGATGACGA 17177 >seq1166 Length=10574 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||| |||| |||| ||||||||||| || |||||| | Sbjct 1785 AAGCCCGTTCCCTTGGCAGTGGGTTCGATAGACAGTAGATAGGGACAGTGGGAATCTCAT 1844 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| | |||||||||||||||| ||||||||||| Sbjct 1845 TAATACATTCATGCGCGTCACTAGTTAGATGACGA 1879 >seq22690 Length=15696 Score = 95.1 bits (104), Expect = 8e-15 Identities = 69/80 (86%), Gaps = 5/80 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| ||||| ||||||||| ||||||||||| || |||||| | Sbjct 6868 AAGCCCGTTCCCTTGGTTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 6927 Query 25957 TAATCCTTTCATGCGCGTCA 25976 |||||| ||||||||||||| Sbjct 6928 TAATCCATTCATGCGCGTCA 6947 >seq20387 Length=3830 Score = 95.1 bits (104), Expect = 8e-15 Identities = 69/80 (86%), Gaps = 5/80 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| ||||| ||||||||| ||||||||||| || |||||| | Sbjct 1663 AAGCCCGTTCCCTTGGTTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 1722 Query 25957 TAATCCTTTCATGCGCGTCA 25976 |||||| ||||||||||||| Sbjct 1723 TAATCCATTCATGCGCGTCA 1742 >seq20386 Length=11487 Score = 95.1 bits (104), Expect = 8e-15 Identities = 69/80 (86%), Gaps = 5/80 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| ||||| ||||||||| ||||||||||| || |||||| | Sbjct 5168 AAGCCCGTTCCCTTGGTTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 5227 Query 25957 TAATCCTTTCATGCGCGTCA 25976 |||||| ||||||||||||| Sbjct 5228 TAATCCATTCATGCGCGTCA 5247 >seq8903 Length=50276 Score = 95.1 bits (104), Expect = 8e-15 Identities = 82/102 (80%), Gaps = 5/102 (5%) Strand=Plus/Plus Query 25895 TTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTA 25949 |||| || ||||||||||||||||||| ||||||||| |||||| |||| | | Sbjct 37580 TTATTCTATGCCCGTTCCCTTGGCTGTGTGTTCGCTAGACAGTAGACAGGGACAGTAGGA 37639 Query 25950 ATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || || || |||| ||||||||||||||| ||||||||||| Sbjct 37640 ATATCATTTATCCACTCATGCGCGTCACTAGTTAGATGACGA 37681 >seq287 Length=164629 Score = 95.1 bits (104), Expect = 8e-15 Identities = 69/80 (86%), Gaps = 5/80 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| ||||| ||||||||| ||||||||||| || |||||| | Sbjct 4035 AAGCCCGTTCCCTTGGTTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCAT 4094 Query 25957 TAATCCTTTCATGCGCGTCA 25976 |||||| ||||||||||||| Sbjct 4095 TAATCCATTCATGCGCGTCA 4114 >seq12834 Length=9984 Score = 93.3 bits (102), Expect = 3e-14 Identities = 68/79 (86%), Gaps = 5/79 (6%) Strand=Plus/Plus Query 25918 CTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGC 25972 |||||| ||||||||| ||||||||||| || |||||| ||||||| ||||||||| Sbjct 7921 CTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGC 7980 Query 25973 GTCACTAATTAGATGACGA 25991 ||||||| ||||||||||| Sbjct 7981 GTCACTAGTTAGATGACGA 7999 >seq233 Length=33321 Score = 89.7 bits (98), Expect = 3e-13 Identities = 74/91 (81%), Gaps = 7/91 (8%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-------GGTAATCTC 25954 |||||||||||||||||||||| ||| ||||| |||||||| || || |||||| Sbjct 15298 AAGCCCGTTCCCTTGGCTGTGGGTTCACTAGACAGTAGATATGGCCAAAGTGGGAATCTC 15357 Query 25955 GTTAATCCTTTCATGCGCGTCACTAATTAGA 25985 |||||| |||||| ||||||||| ||||| Sbjct 15358 AATAATCCATTCATGAGCGTCACTAGTTAGA 15388 >seq18713 Length=15237 Score = 82.4 bits (90), Expect = 5e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 || ||| |||||||||||||||| ||||||||| ||||||||| ||||||||||||| Sbjct 7772 CTGTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGAATACTATCGGTCTCGC 7831 Query 20007 GGTAATATTTAGC 20019 |||||||||| Sbjct 7832 ACCAATATTTAGC 7844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334837855021166