Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq13324 122 7e-23 >seq13324 Length=6237 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || ||||| | ||| || || || || ||||||||||| Sbjct 6132 ATACCACCACGAAGGCGCAGCACCAAATGCAGCGTCGACTCCTTCTGGATGTTGTAATCA 6073 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| || || ||||| || ||||| |||| |||||||| ||||| || Sbjct 6072 GCAAGCGTACGCCCGTCCTCTAGTTGCTTGCCAGCAAAGATTAGACGCTGCTGGTCTGGC 6013 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||||| || | | |||| ||||||| | || Sbjct 6012 GGAATACCTTCCTTGTCTTGAATCTTTGCCTTCACGTTGTCAATCGTGTCGGACGGCTCC 5953 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| ||||| ||||| |||||||||||||| Sbjct 5952 ACATCGAGCGTGATTGTCTTGCCCGTCAGTGTTTTCACAAAAATCTGCAT 5903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419997245287032