Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq24131 105 8e-18 >seq24131 Length=32940 Score = 105 bits (116), Expect = 8e-18 Identities = 198/288 (69%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| ||| || | ||||| || ||| ||| | |||||| ||| | |||||| Sbjct 30996 GCAAAGTCTGTGTGCATACCTTCGTCACGACTGATTAACTCATTCGAGAAACTCAGTCCA 30937 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 |||||||| || | || || ||||||||||||| ||||||| || || || || ||| Sbjct 30936 GGCATGAGCCCGCGCTTTTTGAGCCAAAAGATGGAACAAAAAGAACCTGAGAAAAAAATG 30877 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTG----TCGAA 119671 || || || |||| || || || || ||||| || | | ||| || | || | Sbjct 30876 CCTTCAACTGAGGCAAATGCTAACAGGCGCTCCGC-GTACGACGATACACGCGGATCACA 30818 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATG---CAGGGGACAGTTTGGATGGCTTC 119728 ||| || || ||||||||||| || || | || || | | |||| |||||| Sbjct 30817 CCATTTCAGTGCCCAGTTGGCTTT---CTTTTTGACACATGAAATGGTTTCGATGGCACG 30761 Query 119729 GAAAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAG 119776 || || || || || || | ||||||||||||| |||||||||| Sbjct 30760 TAAGAGGTGGTTTTTCTCCATAACATCCTTAATATACGTATCAATGAG 30713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588778796110800