Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq18532 107 2e-18 >seq18532 Length=6745 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 ||||| || ||||| ||||| | || | | |||| || | ||||| || ||||| || Sbjct 5154 TTTTGGATGTTGTAGTCGGCCAGTGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATT 5213 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 | |||||| || || || || || ||||| || || |||||||| || ||| | || Sbjct 5214 AGACGCTGCTGGTCAGGTGGGATTCCTTCCTTGTCCTGAATTTTGGCCTTAACATTGTCA 5273 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAAT 101461 | ||||| |||| ||||| || | |||| || ||||| || || || || |||||| Sbjct 5274 ATCGTGTCGGACGGCTCCACATCCAACGTGATGGTCTTGCCCGTCAAGGTCTTCACAAAT 5333 Query 101462 ATCTGCATG 101470 ||||||||| Sbjct 5334 ATCTGCATG 5342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396149033182602