Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq15263 138 6e-28 >seq15263 Length=38747 Score = 138 bits (152), Expect = 6e-28 Identities = 313/471 (66%), Gaps = 0/471 (0%) Strand=Plus/Plus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 || |||||||||||| ||| || |||| || || || |||||| ||||| ||| Sbjct 34850 TTCGGACAGAATAAACTCCACTCTCCATTGGCTTCTACGCGCTTCATAAACAAATCAGGA 34909 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 ||||||| |||||||| ||||| | || | | || || ||||| || || | Sbjct 34910 ATCCACAAGGCATAAAACAAATCACGTGCCCGATGTAACTCGTTGCCGTGGTTTTTCCGT 34969 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068 | || || || || | | || | ||||| || || || ||||| ||||| ||| Sbjct 34970 AAGTCCAAAAACTCGAGCACGTCGGCATGCCACGGCTCCAAGTAGATGGCAAACGAGCCT 35029 Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128 || | ||| || || |||||||| || || | ||| || ||||| || || |||||| Sbjct 35030 TTGCGTTTCCCGCCGCCTTGATCCACATACCGTGCCGTATCATTAAAGACGCGCAACATG 35089 Query 26129 GGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATA 26188 |||| | ||| | || | ||||| |||| |||| | || | || ||| Sbjct 35090 GGAATGATCCCATTCGAGGAGCCGTTGGTGCCCCGAATGTAACTGTTGGTTGCTCGAATG 35149 Query 26189 TCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACT 26248 | || | || || || || || |||||||| || ||| ||||| | | || Sbjct 35150 TTATGCATACTGATCCCTATCCCTCCGGCCCATTTAGAGATACAGGCACATTGTTTAAGC 35209 Query 26249 GTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAAT 26308 |||||| |||| |||| || |||| ||| |||| |||||| |||||| || || ||| Sbjct 35210 GTATCGTAAATCCCTTCAATCGAATCATCTTGCATTGCTAATAGAAAACACGAGGACAAT 35269 Query 26309 TGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAA 26359 || | | | ||| || | |||||||| || || || || || ||| || Sbjct 35270 TGGGGCCGGGGTGTCCCCGCGTTAAATAACGTTGGCGTCGCGTGGGTAAAA 35320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252957393984950