Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq15263 105 8e-18 >seq15263 Length=38747 Score = 105 bits (116), Expect = 8e-18 Identities = 372/576 (65%), Gaps = 5/576 (1%) Strand=Plus/Minus Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 || ||||| ||||| ||||| ||| | || | ||||| || ||||| | || Sbjct 35352 TTAGAGACGTACGAGCTCATGTCGCAAAAGTTTTTTACCCACGCGACGCCAACGTTATTT 35293 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || || || ||||| | || || ||||| || || || | || | | || || Sbjct 35292 AACGCGGGGACACCCCGGCCCCAATTGTCCTCGTGTTTTCTATTAGCAATGCAAGATGAT 35233 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || || | || || || | || |||| | ||||| ||||| || ||||| || Sbjct 35232 TCGATTGAAGGGATTTACGATACGCTTAAACAATGTGCCTGTATCTCTAAATGGGCCGGA 35173 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511 || || ||||| || ||| | | |||| | || | |||||||| || || Sbjct 35172 GGGATAGGGATCAGTATGCATAACATTCGAGCAACCAACAGTTACATTCGGGGCACCAAC 35113 Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 || || |||| || ||||| ||| | ||||| ||||| | || || || ||||| Sbjct 35112 GGCTCCTCGAATGGGATCATTCCCATGTTGCGCGTCTTTAATGATACGGCACGGTATGTG 35053 Query 75572 AATCAAG-CGGGGCGT--CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCC 75628 |||||| ||| | | ||||| || || | || |||||||||| || ||||||||| Sbjct 35052 GATCAAGGCGGCGGGAAACGCAAAGGCTCGTTTGCCATCTACTTGGAGCCGTGGCATGCC 34993 Query 75629 GATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGA 75688 || | | ||||| | || ||||| ||||| || |||| |||| | Sbjct 34992 GACGTGCTCGAGTTTTTGGACTTACGGAAAAACCACGGCAACGAGTTACATCGGGCACGT 34933 Query 75689 GATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGT 75748 ||| | |||| || |||||||||| || | || |||||||| || || | ||| Sbjct 34932 GATTTGTTTTATGCCTTGTGGATTCCTGATTTGTTTATGAAGCGCGTAGAAGCCAATGGA 34873 Query 75749 CAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCG-ACGCGGTGGGTGAGGA 75807 | ||| | | |||||||| || | || || ||| | | || | || | ||| | || Sbjct 34872 GAGTGGAGTTTATTCTGTCCGAACGAAGCGCCCGGTTTGTACGAATGCTG-GGGCGCCGA 34814 Query 75808 GTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGG 75843 ||||||| | | ||| || |||| ||| | || || Sbjct 34813 GTTTGAAAACTTGTACGCACAGTACGAACACGATGG 34778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596369853583680